Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC109315.1-201ENST00000584143 1347 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SMAD6O43541 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SMAD6O43541 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMAD6O43541 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMAD6O43541 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.17□□□□□ -1.74
SMAD6O43541 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.17□□□□□ -1.74
SMAD6O43541 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.17□□□□□ -1.74
SMAD6O43541 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMAD6O43541 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMAD6O43541 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.17□□□□□ -1.74
SMAD6O43541 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMAD6O43541 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SMAD6O43541 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMAD6O43541 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMAD6O43541 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SMAD6O43541 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.17□□□□□ -1.74
SMAD6O43541 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.17□□□□□ -1.74
SMAD6O43541 RNU6-452P-201ENST00000384406 107 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMAD6O43541 HSPE1P12-201ENST00000412576 301 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 TCEA1P4-201ENST00000415066 844 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.17□□□□□ -1.74
SMAD6O43541 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.17□□□□□ -1.74
SMAD6O43541 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.17□□□□□ -1.74
SMAD6O43541 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.17□□□□□ -1.74
SMAD6O43541 AL358472.1-201ENST00000431295 329 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.17□□□□□ -1.74
SMAD6O43541 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.17□□□□□ -1.74
SMAD6O43541 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.17□□□□□ -1.74
SMAD6O43541 AL162151.2-201ENST00000448875 158 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 RFC5P1-201ENST00000454419 874 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 RPL5P24-201ENST00000463742 885 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 MTND1P16-201ENST00000465177 898 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AC087385.1-201ENST00000475062 312 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.17□□□□□ -1.74
SMAD6O43541 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.17□□□□□ -1.74
SMAD6O43541 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.17□□□□□ -1.74
SMAD6O43541 ARL2BPP4-201ENST00000506854 471 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AC090071.1-201ENST00000507713 644 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AC006499.6-201ENST00000511169 607 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AC026402.1-201ENST00000513642 170 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AC025881.1-201ENST00000518851 512 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.17□□□□□ -1.74
SMAD6O43541 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMAD6O43541 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.17□□□□□ -1.74
SMAD6O43541 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.17□□□□□ -1.74
SMAD6O43541 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.17□□□□□ -1.74
SMAD6O43541 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.17□□□□□ -1.74
SMAD6O43541 AC074029.1-201ENST00000552531 1044 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.17□□□□□ -1.74
SMAD6O43541 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.17□□□□□ -1.74
SMAD6O43541 RPL23AP87-202ENST00000573039 466 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.17□□□□□ -1.74
SMAD6O43541 OR4K7P-201ENST00000580232 945 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.17□□□□□ -1.74
SMAD6O43541 MIR4719-201ENST00000585233 84 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 EIF1P6-201ENST00000600054 334 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 VN1R85P-201ENST00000601587 426 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AC025946.2-201ENST00000603398 234 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AL353621.2-201ENST00000605340 133 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AC090525.3-201ENST00000605601 189 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AC068276.1-201ENST00000605793 379 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AC091946.2-201ENST00000606105 291 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 MIR7844-201ENST00000616161 122 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AP003400.5-201ENST00000624827 617 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.17□□□□□ -1.74
SMAD6O43541 AC099063.3-201ENST00000642066 185 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.17□□□□□ -1.74
SMAD6O43541 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
SMAD6O43541 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SMAD6O43541 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SMAD6O43541 ERCC6-202ENST00000374127 1782 ntBASIC4.17□□□□□ -1.74
SMAD6O43541 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.17□□□□□ -1.74
SMAD6O43541 NSRP1P1-201ENST00000444067 1693 ntBASIC4.16□□□□□ -1.74
SMAD6O43541 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SMAD6O43541 RNA5SP52-201ENST00000362448 134 ntBASIC4.16□□□□□ -1.74
SMAD6O43541 Y_RNA.18-201ENST00000362461 102 ntBASIC4.16□□□□□ -1.74
SMAD6O43541 RNY4P24-201ENST00000362735 96 ntBASIC4.16□□□□□ -1.74
SMAD6O43541 MIR525-201ENST00000384978 85 ntBASIC4.16□□□□□ -1.74
SMAD6O43541 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SMAD6O43541 RPS3AP24-201ENST00000407896 734 ntBASIC4.16□□□□□ -1.74
SMAD6O43541 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.16□□□□□ -1.74
SMAD6O43541 RAC1P3-201ENST00000416129 580 ntBASIC4.16□□□□□ -1.74
SMAD6O43541 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.16□□□□□ -1.74
SMAD6O43541 AL031736.2-201ENST00000426573 787 ntBASIC4.16□□□□□ -1.74
SMAD6O43541 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.16□□□□□ -1.74
SMAD6O43541 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.16□□□□□ -1.74
SMAD6O43541 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.16□□□□□ -1.74
SMAD6O43541 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.16□□□□□ -1.74
SMAD6O43541 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SMAD6O43541 RPS4XP4-201ENST00000443195 763 ntBASIC4.16□□□□□ -1.74
SMAD6O43541 ARL5AP2-201ENST00000444698 533 ntBASIC4.16□□□□□ -1.74
SMAD6O43541 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.16□□□□□ -1.74
SMAD6O43541 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.16□□□□□ -1.74
SMAD6O43541 RPL7P48-201ENST00000461513 746 ntBASIC4.16□□□□□ -1.74
SMAD6O43541 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.16□□□□□ -1.74
SMAD6O43541 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMAD6O43541 AC025445.1-201ENST00000502728 300 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms