Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.49□□□□□ -1.69
PHGDHO43175 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 Y_RNA.3-201ENST00000362331 103 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 RNU6-359P-201ENST00000365466 108 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.49□□□□□ -1.69
PHGDHO43175 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PHGDHO43175 AL049693.1-201ENST00000402760 611 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 LAP3P1-201ENST00000403648 294 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 AL121834.1-202ENST00000404494 277 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.49□□□□□ -1.69
PHGDHO43175 SPA17P1-201ENST00000416656 452 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 NANOGP6-201ENST00000429190 847 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 AC108734.1-201ENST00000439549 399 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 AC112653.1-201ENST00000443851 386 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.49□□□□□ -1.69
PHGDHO43175 AC098824.1-201ENST00000453565 980 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.49□□□□□ -1.69
PHGDHO43175 snoU109.4-201ENST00000458953 143 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 ST13P14-201ENST00000474095 734 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 RPL23AP65-201ENST00000475608 468 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.49□□□□□ -1.69
PHGDHO43175 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.49□□□□□ -1.69
PHGDHO43175 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.49□□□□□ -1.69
PHGDHO43175 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.49□□□□□ -1.69
PHGDHO43175 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.49□□□□□ -1.69
PHGDHO43175 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.49□□□□□ -1.69
PHGDHO43175 RNU4-60P-201ENST00000517239 135 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.49□□□□□ -1.69
PHGDHO43175 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.49□□□□□ -1.69
PHGDHO43175 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 AL157394.1-201ENST00000562983 1224 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.49□□□□□ -1.69
PHGDHO43175 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.49□□□□□ -1.69
PHGDHO43175 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.49□□□□□ -1.69
PHGDHO43175 AC011816.2-201ENST00000607089 556 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 OR10AB1P-201ENST00000609613 938 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 AC068792.1-201ENST00000621354 417 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PHGDHO43175 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.49□□□□□ -1.69
PHGDHO43175 AC099654.13-201ENST00000639774 207 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.49□□□□□ -1.69
PHGDHO43175 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.49□□□□□ -1.69
PHGDHO43175 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.48□□□□□ -1.69
PHGDHO43175 ZNF137P-201ENST00000456718 1920 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
PHGDHO43175 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PHGDHO43175 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PHGDHO43175 RNU1-108P-201ENST00000362556 161 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PHGDHO43175 RNU1-44P-201ENST00000384453 163 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 AC136624.1-201ENST00000400791 413 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 RPL7P25-201ENST00000404151 721 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 RNU6-648P-201ENST00000410190 107 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.48□□□□□ -1.69
PHGDHO43175 AL160275.2-201ENST00000412010 394 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.48□□□□□ -1.69
PHGDHO43175 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.48□□□□□ -1.69
PHGDHO43175 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 OR5BE1P-201ENST00000425977 939 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 AC010975.2-201ENST00000427781 588 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 RPL23AP25-201ENST00000430973 463 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 UBE2V1P13-201ENST00000436983 439 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 PGBD4P3-201ENST00000440731 581 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 AC012158.1-204ENST00000483430 465 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 OR7H2P-201ENST00000513483 306 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.48□□□□□ -1.69
PHGDHO43175 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.48□□□□□ -1.69
PHGDHO43175 AP003467.2-201ENST00000520175 319 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.48□□□□□ -1.69
PHGDHO43175 IGLV3-26-201ENST00000520756 302 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 AC090151.1-201ENST00000520784 730 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 AC100770.1-201ENST00000532310 322 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.48□□□□□ -1.69
PHGDHO43175 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.48□□□□□ -1.69
PHGDHO43175 AC009101.1-201ENST00000568135 242 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 OR1F2P-201ENST00000570470 933 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.48□□□□□ -1.69
PHGDHO43175 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.48□□□□□ -1.69
PHGDHO43175 AC007448.1-201ENST00000582714 234 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.48□□□□□ -1.69
PHGDHO43175 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 IGHV3-29-201ENST00000604817 344 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 AC109347.2-201ENST00000610220 349 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms