Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CDX4O14627 AL133412.1-201ENST00000380194 2992 ntBASIC3.33□□□□□ -1.88
CDX4O14627 AC063979.1-201ENST00000415539 377 ntBASIC3.33□□□□□ -1.88
CDX4O14627 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.33□□□□□ -1.88
CDX4O14627 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.33□□□□□ -1.88
CDX4O14627 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.33□□□□□ -1.88
CDX4O14627 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.33□□□□□ -1.88
CDX4O14627 AL358794.1-201ENST00000445689 381 ntBASIC3.33□□□□□ -1.88
CDX4O14627 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.33□□□□□ -1.88
CDX4O14627 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.33□□□□□ -1.88
CDX4O14627 AC004069.2-201ENST00000505438 1114 ntBASIC3.33□□□□□ -1.88
CDX4O14627 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.33□□□□□ -1.88
CDX4O14627 AP001207.2-201ENST00000519490 539 ntBASIC3.33□□□□□ -1.88
CDX4O14627 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.33□□□□□ -1.88
CDX4O14627 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.33□□□□□ -1.88
CDX4O14627 MTND3P12-201ENST00000559068 328 ntBASIC3.33□□□□□ -1.88
CDX4O14627 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.33□□□□□ -1.88
CDX4O14627 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.33□□□□□ -1.88
CDX4O14627 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDX4O14627 AC022069.1-201ENST00000582910 658 ntBASIC3.33□□□□□ -1.88
CDX4O14627 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.33□□□□□ -1.88
CDX4O14627 RPP40P2-201ENST00000603596 712 ntBASIC3.33□□□□□ -1.88
CDX4O14627 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.33□□□□□ -1.88
CDX4O14627 AC015813.4-201ENST00000610469 179 ntBASIC3.33□□□□□ -1.88
CDX4O14627 MIR7106-201ENST00000612419 65 ntBASIC3.33□□□□□ -1.88
CDX4O14627 AC105227.2-201ENST00000615075 605 ntBASIC3.33□□□□□ -1.88
CDX4O14627 AC009159.2-201ENST00000617603 606 ntBASIC3.33□□□□□ -1.88
CDX4O14627 VN1R7P-201ENST00000619242 903 ntBASIC3.33□□□□□ -1.88
CDX4O14627 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.33□□□□□ -1.88
CDX4O14627 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.33□□□□□ -1.88
CDX4O14627 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.33□□□□□ -1.88
CDX4O14627 AC068620.4-201ENST00000636730 1182 ntBASIC3.33□□□□□ -1.88
CDX4O14627 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.33□□□□□ -1.88
CDX4O14627 SEPT7P7-201ENST00000420492 1301 ntBASIC3.33□□□□□ -1.88
CDX4O14627 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDX4O14627 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.33□□□□□ -1.88
CDX4O14627 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.33□□□□□ -1.88
CDX4O14627 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDX4O14627 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.33□□□□□ -1.88
CDX4O14627 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDX4O14627 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CDX4O14627 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDX4O14627 PNPT1P2-201ENST00000456768 2050 ntBASIC3.32□□□□□ -1.88
CDX4O14627 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDX4O14627 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.32□□□□□ -1.88
CDX4O14627 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDX4O14627 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CDX4O14627 RNU1-140P-201ENST00000365040 165 ntBASIC3.32□□□□□ -1.88
CDX4O14627 MCTS2P-201ENST00000394552 546 ntBASIC3.32□□□□□ -1.88
CDX4O14627 ANAPC10P1-201ENST00000395991 556 ntBASIC3.32□□□□□ -1.88
CDX4O14627 AL138885.1-201ENST00000405921 675 ntBASIC3.32□□□□□ -1.88
CDX4O14627 U3.39-201ENST00000408569 239 ntBASIC3.32□□□□□ -1.88
CDX4O14627 RPS7P9-201ENST00000414704 586 ntBASIC3.32□□□□□ -1.88
CDX4O14627 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.32□□□□□ -1.88
CDX4O14627 AC092447.3-201ENST00000426027 686 ntBASIC3.32□□□□□ -1.88
CDX4O14627 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.32□□□□□ -1.88
CDX4O14627 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.32□□□□□ -1.88
CDX4O14627 AC107083.1-201ENST00000439643 279 ntBASIC3.32□□□□□ -1.88
CDX4O14627 MTCO1P53-201ENST00000441633 699 ntBASIC3.32□□□□□ -1.88
CDX4O14627 MTCYBP42-201ENST00000444653 1130 ntBASIC3.32□□□□□ -1.88
CDX4O14627 HMGN3P1-201ENST00000453847 193 ntBASIC3.32□□□□□ -1.88
CDX4O14627 RPL21P71-201ENST00000465598 459 ntBASIC3.32□□□□□ -1.88
CDX4O14627 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.32□□□□□ -1.88
CDX4O14627 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.32□□□□□ -1.88
CDX4O14627 AC012170.1-201ENST00000495139 359 ntBASIC3.32□□□□□ -1.88
CDX4O14627 AC021146.5-201ENST00000503544 545 ntBASIC3.32□□□□□ -1.88
CDX4O14627 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.32□□□□□ -1.88
CDX4O14627 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.32□□□□□ -1.88
CDX4O14627 AC109458.1-201ENST00000508858 316 ntBASIC3.32□□□□□ -1.88
CDX4O14627 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.32□□□□□ -1.88
CDX4O14627 AC027309.2-201ENST00000520566 192 ntBASIC3.32□□□□□ -1.88
CDX4O14627 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.32□□□□□ -1.88
CDX4O14627 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.32□□□□□ -1.88
CDX4O14627 EEF1A1P37-201ENST00000522748 715 ntBASIC3.32□□□□□ -1.88
CDX4O14627 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDX4O14627 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.32□□□□□ -1.88
CDX4O14627 LRRC34P1-201ENST00000542742 915 ntBASIC3.32□□□□□ -1.88
CDX4O14627 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.32□□□□□ -1.88
CDX4O14627 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.32□□□□□ -1.88
CDX4O14627 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.32□□□□□ -1.88
CDX4O14627 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDX4O14627 AL160237.3-201ENST00000604114 1013 ntBASIC3.32□□□□□ -1.88
CDX4O14627 AL139286.1-201ENST00000604465 483 ntBASIC3.32□□□□□ -1.88
CDX4O14627 AC009974.1-201ENST00000608881 455 ntBASIC3.32□□□□□ -1.88
CDX4O14627 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.32□□□□□ -1.88
CDX4O14627 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.32□□□□□ -1.88
CDX4O14627 AL359535.1-201ENST00000612100 1087 ntBASIC3.32□□□□□ -1.88
CDX4O14627 AC138932.5-201ENST00000617759 563 ntBASIC3.32□□□□□ -1.88
CDX4O14627 AC006963.1-201ENST00000624003 1052 ntBASIC3.32□□□□□ -1.88
CDX4O14627 OR11H5P-202ENST00000641612 1325 ntBASIC3.32□□□□□ -1.88
CDX4O14627 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CDX4O14627 MTCO1P24-201ENST00000515438 1558 ntBASIC3.32□□□□□ -1.88
CDX4O14627 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.32□□□□□ -1.88
CDX4O14627 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDX4O14627 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CDX4O14627 AL356489.2-201ENST00000566968 3528 ntBASIC3.32□□□□□ -1.88
CDX4O14627 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDX4O14627 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.32□□□□□ -1.88
CDX4O14627 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDX4O14627 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms