Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRIM38O00635 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRIM38O00635 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM38O00635 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM38O00635 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM38O00635 AL356489.2-201ENST00000566968 3528 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM38O00635 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM38O00635 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM38O00635 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM38O00635 RNU6-374P-201ENST00000364146 108 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 RNVU1-3-201ENST00000364313 161 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 SNORD82-201ENST00000365530 70 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM38O00635 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM38O00635 Y_RNA.390-201ENST00000383932 102 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 RNU6-878P-201ENST00000384578 110 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 MIR659-201ENST00000384963 97 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM38O00635 AC083875.1-201ENST00000419509 405 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 AC005517.2-201ENST00000424673 553 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM38O00635 ZYG11AP1-201ENST00000430329 837 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 MTND3P23-201ENST00000431980 347 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM38O00635 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM38O00635 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM38O00635 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM38O00635 ZFRP1-201ENST00000457579 2970 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 RPL21P126-201ENST00000470049 478 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 AC087312.1-201ENST00000471411 480 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM38O00635 AC012158.1-204ENST00000483430 465 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM38O00635 AC109458.1-201ENST00000508858 316 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM38O00635 HSPE1P23-201ENST00000509838 286 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 NDUFA5P2-201ENST00000519723 344 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.53□□□□□ -1.68
TRIM38O00635 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM38O00635 AC016957.1-201ENST00000534895 309 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 AL121766.1-201ENST00000547436 487 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM38O00635 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM38O00635 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM38O00635 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM38O00635 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM38O00635 AL109766.1-201ENST00000555080 552 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 ANP32BP3-201ENST00000559213 706 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM38O00635 AC136619.2-201ENST00000563361 631 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM38O00635 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM38O00635 MIR3138-201ENST00000585238 82 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM38O00635 RPL7P50-201ENST00000600588 727 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 AL109618.2-201ENST00000605527 211 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM38O00635 AC128687.2-201ENST00000609657 566 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM38O00635 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM38O00635 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM38O00635 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM38O00635 AC015813.6-201ENST00000624409 5808 ntBASIC4.53□□□□□ -1.68
TRIM38O00635 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM38O00635 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
TRIM38O00635 AC108467.2-201ENST00000617640 1597 ntBASIC4.53□□□□□ -1.69
TRIM38O00635 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.53□□□□□ -1.69
TRIM38O00635 AC125257.1-201ENST00000560400 2930 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM38O00635 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
TRIM38O00635 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM38O00635 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM38O00635 RPL21P132-201ENST00000331267 462 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 RNU6-500P-201ENST00000362349 107 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 OR6C69P-201ENST00000394268 893 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM38O00635 DEFB108C-201ENST00000400154 252 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM38O00635 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM38O00635 RPS12P23-201ENST00000419579 400 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 ELOCP18-201ENST00000434209 337 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM38O00635 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.52□□□□□ -1.69
TRIM38O00635 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM38O00635 SUMO2P2-201ENST00000456482 255 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 RNU7-136P-201ENST00000458819 69 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 MTCO3P38-201ENST00000468910 766 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 RPS26P28-201ENST00000470806 348 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRIM38O00635 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM38O00635 AC005178.1-201ENST00000508392 440 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 AC079140.3-201ENST00000511111 550 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 PTGES3P3-201ENST00000511479 482 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 RNA5SP446-201ENST00000515955 82 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 IGLVIV-65-201ENST00000517313 360 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM38O00635 AP002963.1-201ENST00000530590 184 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 AP003385.6-201ENST00000531603 374 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms