Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
UPK2O00526 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.59□□□□□ -1.99
UPK2O00526 U3.6-201ENST00000363622 211 ntBASIC2.59□□□□□ -1.99
UPK2O00526 RNU1-64P-201ENST00000365443 163 ntBASIC2.59□□□□□ -1.99
UPK2O00526 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
UPK2O00526 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
UPK2O00526 MTND4LP20-201ENST00000402379 270 ntBASIC2.59□□□□□ -1.99
UPK2O00526 RNU4-27P-201ENST00000410889 139 ntBASIC2.59□□□□□ -1.99
UPK2O00526 HMGN1P24-201ENST00000412282 298 ntBASIC2.59□□□□□ -1.99
UPK2O00526 RPS29P4-201ENST00000414733 161 ntBASIC2.59□□□□□ -1.99
UPK2O00526 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.59□□□□□ -1.99
UPK2O00526 AL357078.2-201ENST00000416486 427 ntBASIC2.59□□□□□ -1.99
UPK2O00526 UBE2D3P2-201ENST00000424409 445 ntBASIC2.59□□□□□ -1.99
UPK2O00526 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
UPK2O00526 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.59□□□□□ -1.99
UPK2O00526 RPS23P3-201ENST00000470993 430 ntBASIC2.59□□□□□ -1.99
UPK2O00526 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
UPK2O00526 RPL21P13-201ENST00000488305 481 ntBASIC2.59□□□□□ -1.99
UPK2O00526 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.59□□□□□ -1.99
UPK2O00526 AC010468.3-201ENST00000508225 458 ntBASIC2.59□□□□□ -1.99
UPK2O00526 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.59□□□□□ -1.99
UPK2O00526 RNU1-45P-201ENST00000517191 141 ntBASIC2.59□□□□□ -1.99
UPK2O00526 AC026403.1-201ENST00000518938 295 ntBASIC2.59□□□□□ -1.99
UPK2O00526 AC245166.1-201ENST00000521012 253 ntBASIC2.59□□□□□ -1.99
UPK2O00526 IGHV3-76-201ENST00000522465 295 ntBASIC2.59□□□□□ -1.99
UPK2O00526 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.59□□□□□ -1.99
UPK2O00526 AP000619.3-201ENST00000535634 1127 ntBASIC2.59□□□□□ -1.99
UPK2O00526 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.59□□□□□ -1.99
UPK2O00526 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.59□□□□□ -1.99
UPK2O00526 AC074051.3-201ENST00000570238 358 ntBASIC2.59□□□□□ -1.99
UPK2O00526 COX6CP3-201ENST00000580869 223 ntBASIC2.59□□□□□ -1.99
UPK2O00526 AC093227.2-201ENST00000589357 285 ntBASIC2.59□□□□□ -1.99
UPK2O00526 AC068831.7-201ENST00000616954 363 ntBASIC2.59□□□□□ -1.99
UPK2O00526 AC073968.1-201ENST00000618594 637 ntBASIC2.59□□□□□ -1.99
UPK2O00526 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.59□□□□□ -1.99
UPK2O00526 AC106730.3-201ENST00000624568 641 ntBASIC2.59□□□□□ -1.99
UPK2O00526 MTND2P41-201ENST00000637599 773 ntBASIC2.59□□□□□ -1.99
UPK2O00526 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
UPK2O00526 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.59□□□□□ -2
UPK2O00526 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
UPK2O00526 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.58□□□□□ -2
UPK2O00526 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.58□□□□□ -2
UPK2O00526 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.58□□□□□ -2
UPK2O00526 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
UPK2O00526 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.58□□□□□ -2
UPK2O00526 RNA5SP50-201ENST00000363731 107 ntBASIC2.58□□□□□ -2
UPK2O00526 RNU6-481P-201ENST00000384194 107 ntBASIC2.58□□□□□ -2
UPK2O00526 MIR554-201ENST00000384874 96 ntBASIC2.58□□□□□ -2
UPK2O00526 RNU1-101P-201ENST00000391171 127 ntBASIC2.58□□□□□ -2
UPK2O00526 RPL31P1-201ENST00000398116 372 ntBASIC2.58□□□□□ -2
UPK2O00526 BX323014.1-201ENST00000412876 237 ntBASIC2.58□□□□□ -2
UPK2O00526 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.58□□□□□ -2
UPK2O00526 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.58□□□□□ -2
UPK2O00526 HSFY4P-201ENST00000415994 1181 ntBASIC2.58□□□□□ -2
UPK2O00526 MTCO3P12-201ENST00000416718 547 ntBASIC2.58□□□□□ -2
UPK2O00526 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.58□□□□□ -2
UPK2O00526 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.58□□□□□ -2
UPK2O00526 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.58□□□□□ -2
UPK2O00526 AC127537.2-201ENST00000439258 465 ntBASIC2.58□□□□□ -2
UPK2O00526 ELOCP3-201ENST00000439303 348 ntBASIC2.58□□□□□ -2
UPK2O00526 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.58□□□□□ -2
UPK2O00526 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.58□□□□□ -2
UPK2O00526 AC015908.1-201ENST00000478739 476 ntBASIC2.58□□□□□ -2
UPK2O00526 AC092185.1-201ENST00000491371 97 ntBASIC2.58□□□□□ -2
UPK2O00526 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.58□□□□□ -2
UPK2O00526 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.58□□□□□ -2
UPK2O00526 SNORA76.2-201ENST00000517095 137 ntBASIC2.58□□□□□ -2
UPK2O00526 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.58□□□□□ -2
UPK2O00526 OR8I1P-201ENST00000529291 931 ntBASIC2.58□□□□□ -2
UPK2O00526 OR8K4P-201ENST00000534608 872 ntBASIC2.58□□□□□ -2
UPK2O00526 HIGD1AP1-201ENST00000550979 275 ntBASIC2.58□□□□□ -2
UPK2O00526 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.58□□□□□ -2
UPK2O00526 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.58□□□□□ -2
UPK2O00526 NIFKP8-201ENST00000560500 874 ntBASIC2.58□□□□□ -2
UPK2O00526 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.58□□□□□ -2
UPK2O00526 SNORD39.3-201ENST00000584451 71 ntBASIC2.58□□□□□ -2
UPK2O00526 MIR3922-201ENST00000585192 84 ntBASIC2.58□□□□□ -2
UPK2O00526 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.58□□□□□ -2
UPK2O00526 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.58□□□□□ -2
UPK2O00526 ZNF92P2-201ENST00000600543 1059 ntBASIC2.58□□□□□ -2
UPK2O00526 AC008962.1-201ENST00000605729 304 ntBASIC2.58□□□□□ -2
UPK2O00526 AC016877.3-201ENST00000606778 504 ntBASIC2.58□□□□□ -2
UPK2O00526 AC100814.1-201ENST00000606963 623 ntBASIC2.58□□□□□ -2
UPK2O00526 AC107294.3-201ENST00000609211 526 ntBASIC2.58□□□□□ -2
UPK2O00526 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.58□□□□□ -2
UPK2O00526 AC068722.2-201ENST00000618734 544 ntBASIC2.58□□□□□ -2
UPK2O00526 AC039056.2-201ENST00000622261 511 ntBASIC2.58□□□□□ -2
UPK2O00526 AC097372.4-201ENST00000625025 466 ntBASIC2.58□□□□□ -2
UPK2O00526 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.58□□□□□ -2
UPK2O00526 MTND5P24-201ENST00000438892 1767 ntBASIC2.58□□□□□ -2
UPK2O00526 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
UPK2O00526 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
UPK2O00526 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.58□□□□□ -2
UPK2O00526 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UPK2O00526 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
UPK2O00526 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.57□□□□□ -2
UPK2O00526 RNU6-650P-201ENST00000365658 111 ntBASIC2.57□□□□□ -2
UPK2O00526 AC234772.1-201ENST00000377927 937 ntBASIC2.57□□□□□ -2
UPK2O00526 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.57□□□□□ -2
UPK2O00526 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms