Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXN3O00409 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN3O00409 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
FOXN3O00409 RNU1-94P-201ENST00000362627 173 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 RNU6-744P-201ENST00000365557 107 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN3O00409 RNU6-1316P-201ENST00000384242 108 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 MIR192-201ENST00000384915 110 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXN3O00409 RPL36AP36-201ENST00000418616 301 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 RPS27AP14-201ENST00000422868 454 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 RBMY1KP-201ENST00000423480 476 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 CYCSP46-201ENST00000423569 204 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AC007742.1-201ENST00000425789 329 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXN3O00409 AL132765.1-201ENST00000434165 553 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 ELOCP26-201ENST00000436067 329 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXN3O00409 AC009963.2-201ENST00000453431 138 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXN3O00409 SUMO2P2-201ENST00000456482 255 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 RN7SL98P-201ENST00000462271 300 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 RPL7AP28-201ENST00000464513 571 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AC007686.1-201ENST00000488511 463 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXN3O00409 AC010424.1-201ENST00000506336 297 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXN3O00409 AC025881.1-201ENST00000518851 512 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN3O00409 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXN3O00409 AP003385.6-201ENST00000531603 374 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AC068587.4-201ENST00000533893 186 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXN3O00409 CYP4A43P-201ENST00000568156 121 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 RSL24D1P11-201ENST00000591045 491 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AC068790.6-201ENST00000602558 258 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AC090948.1-201ENST00000607464 549 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AL357080.1-201ENST00000617394 239 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AL713922.2-201ENST00000619384 716 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AL445264.1-201ENST00000621719 171 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AC006065.5-201ENST00000623427 349 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AC008013.2-202ENST00000637965 364 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXN3O00409 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN3O00409 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
FOXN3O00409 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 IQCB2P-201ENST00000401788 1633 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 AC097714.1-201ENST00000511272 1647 ntBASIC4.6□□□□□ -1.67
FOXN3O00409 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXN3O00409 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
FOXN3O00409 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN3O00409 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN3O00409 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXN3O00409 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXN3O00409 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
FOXN3O00409 RNU6-853P-201ENST00000364306 107 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 RNY3P10-201ENST00000384764 102 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXN3O00409 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXN3O00409 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.59□□□□□ -1.67
FOXN3O00409 MTCO1P17-201ENST00000411522 491 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXN3O00409 AC127526.1-201ENST00000417526 366 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXN3O00409 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXN3O00409 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXN3O00409 EIF1P3-201ENST00000423841 334 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AL157831.1-201ENST00000426134 473 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXN3O00409 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXN3O00409 COX6CP2-201ENST00000444980 225 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 PHBP16-201ENST00000446318 950 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 PPIAP3-201ENST00000450588 505 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 MTCO2P18-201ENST00000457151 658 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXN3O00409 AC104563.1-201ENST00000476147 376 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AC093267.1-201ENST00000489176 961 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AP001025.2-201ENST00000490908 477 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXN3O00409 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXN3O00409 AC020593.1-201ENST00000507399 299 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.59□□□□□ -1.67
FOXN3O00409 AC006390.1-201ENST00000508068 283 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AC095050.2-201ENST00000510748 1458 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AC093677.1-201ENST00000514414 678 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AC093853.1-201ENST00000515689 483 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXN3O00409 MTND4LP18-201ENST00000526864 291 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
FOXN3O00409 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXN3O00409 TRAV8-5-201ENST00000537369 341 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
FOXN3O00409 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXN3O00409 AC012213.3-201ENST00000577199 777 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.59□□□□□ -1.67
FOXN3O00409 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AC022916.3-201ENST00000592961 742 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AL451044.1-201ENST00000604867 238 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 AC008725.1-201ENST00000605123 2263 ntBASIC4.59□□□□□ -1.67
FOXN3O00409 HMGN2P28-201ENST00000606102 262 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms