Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC016716.1-201ENST00000265882 708 ntBASIC3.08□□□□□ -1.92
DFFAO00273 RNU6-1243P-201ENST00000364028 107 ntBASIC3.08□□□□□ -1.92
DFFAO00273 RNU6-335P-201ENST00000364563 113 ntBASIC3.08□□□□□ -1.92
DFFAO00273 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
DFFAO00273 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
DFFAO00273 EIF5P1-201ENST00000400019 1231 ntBASIC3.08□□□□□ -1.92
DFFAO00273 RN7SKP220-201ENST00000410611 288 ntBASIC3.08□□□□□ -1.92
DFFAO00273 AC092745.2-202ENST00000411880 369 ntBASIC3.08□□□□□ -1.92
DFFAO00273 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.08□□□□□ -1.92
DFFAO00273 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.08□□□□□ -1.92
DFFAO00273 AC022018.1-201ENST00000430685 241 ntBASIC3.08□□□□□ -1.92
DFFAO00273 AC127537.2-201ENST00000439258 465 ntBASIC3.08□□□□□ -1.92
DFFAO00273 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.08□□□□□ -1.92
DFFAO00273 AC233982.1-201ENST00000451247 436 ntBASIC3.08□□□□□ -1.92
DFFAO00273 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.08□□□□□ -1.92
DFFAO00273 MTND3P4-201ENST00000453537 303 ntBASIC3.08□□□□□ -1.92
DFFAO00273 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.08□□□□□ -1.92
DFFAO00273 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.08□□□□□ -1.92
DFFAO00273 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.08□□□□□ -1.92
DFFAO00273 snoU13.22-201ENST00000459428 104 ntBASIC3.08□□□□□ -1.92
DFFAO00273 AP001992.1-205ENST00000462248 379 ntBASIC3.08□□□□□ -1.92
DFFAO00273 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.08□□□□□ -1.92
DFFAO00273 AC012181.1-201ENST00000479895 423 ntBASIC3.08□□□□□ -1.92
DFFAO00273 RPS4XP13-201ENST00000483219 789 ntBASIC3.08□□□□□ -1.92
DFFAO00273 AC068724.1-201ENST00000487100 792 ntBASIC3.08□□□□□ -1.92
DFFAO00273 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.08□□□□□ -1.92
DFFAO00273 AC092185.1-201ENST00000491371 97 ntBASIC3.08□□□□□ -1.92
DFFAO00273 RN7SKP244-201ENST00000516513 307 ntBASIC3.08□□□□□ -1.92
DFFAO00273 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.08□□□□□ -1.92
DFFAO00273 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.08□□□□□ -1.92
DFFAO00273 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.08□□□□□ -1.92
DFFAO00273 AC083923.1-201ENST00000523708 376 ntBASIC3.08□□□□□ -1.92
DFFAO00273 OR4T1P-201ENST00000554933 911 ntBASIC3.08□□□□□ -1.92
DFFAO00273 MTATP6P25-201ENST00000574491 261 ntBASIC3.08□□□□□ -1.92
DFFAO00273 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.08□□□□□ -1.92
DFFAO00273 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.08□□□□□ -1.92
DFFAO00273 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.08□□□□□ -1.92
DFFAO00273 AC006539.2-201ENST00000601729 572 ntBASIC3.08□□□□□ -1.92
DFFAO00273 BNIP3P11-201ENST00000603878 563 ntBASIC3.08□□□□□ -1.92
DFFAO00273 OR2BH1P-201ENST00000608850 864 ntBASIC3.08□□□□□ -1.92
DFFAO00273 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.08□□□□□ -1.92
DFFAO00273 AL162274.2-201ENST00000614406 332 ntBASIC3.08□□□□□ -1.92
DFFAO00273 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.08□□□□□ -1.92
DFFAO00273 AC024595.1-201ENST00000623088 387 ntBASIC3.08□□□□□ -1.92
DFFAO00273 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.08□□□□□ -1.92
DFFAO00273 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
DFFAO00273 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.08□□□□□ -1.92
DFFAO00273 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.07□□□□□ -1.92
DFFAO00273 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.07□□□□□ -1.92
DFFAO00273 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.07□□□□□ -1.92
DFFAO00273 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
DFFAO00273 RPL23AP57-201ENST00000332361 466 ntBASIC3.07□□□□□ -1.92
DFFAO00273 RNU6-600P-201ENST00000362524 99 ntBASIC3.07□□□□□ -1.92
DFFAO00273 SNORA51.12-201ENST00000384448 134 ntBASIC3.07□□□□□ -1.92
DFFAO00273 MTCYBP24-201ENST00000420387 1106 ntBASIC3.07□□□□□ -1.92
DFFAO00273 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.07□□□□□ -1.92
DFFAO00273 AC012498.1-201ENST00000424037 437 ntBASIC3.07□□□□□ -1.92
DFFAO00273 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
DFFAO00273 HMGB1P12-201ENST00000438594 598 ntBASIC3.07□□□□□ -1.92
DFFAO00273 AC009969.1-201ENST00000438726 172 ntBASIC3.07□□□□□ -1.92
DFFAO00273 RPS3AP12-201ENST00000443616 753 ntBASIC3.07□□□□□ -1.92
DFFAO00273 RPS27P5-201ENST00000444247 244 ntBASIC3.07□□□□□ -1.92
DFFAO00273 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.07□□□□□ -1.92
DFFAO00273 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.07□□□□□ -1.92
DFFAO00273 AC008280.2-201ENST00000455473 307 ntBASIC3.07□□□□□ -1.92
DFFAO00273 ARPC3P2-201ENST00000457786 533 ntBASIC3.07□□□□□ -1.92
DFFAO00273 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.07□□□□□ -1.92
DFFAO00273 RN7SL75P-201ENST00000461926 281 ntBASIC3.07□□□□□ -1.92
DFFAO00273 AC117440.1-201ENST00000474107 571 ntBASIC3.07□□□□□ -1.92
DFFAO00273 RN7SL633P-201ENST00000488974 297 ntBASIC3.07□□□□□ -1.92
DFFAO00273 RPL23AP55-201ENST00000498163 452 ntBASIC3.07□□□□□ -1.92
DFFAO00273 OR2A20P-203ENST00000498397 1268 ntBASIC3.07□□□□□ -1.92
DFFAO00273 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
DFFAO00273 AC026427.2-201ENST00000506228 536 ntBASIC3.07□□□□□ -1.92
DFFAO00273 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.07□□□□□ -1.92
DFFAO00273 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.07□□□□□ -1.92
DFFAO00273 RNA5SP341-201ENST00000516261 117 ntBASIC3.07□□□□□ -1.92
DFFAO00273 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.07□□□□□ -1.92
DFFAO00273 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.07□□□□□ -1.92
DFFAO00273 PSMA2P1-201ENST00000526365 646 ntBASIC3.07□□□□□ -1.92
DFFAO00273 MTCYBP41-201ENST00000528913 1123 ntBASIC3.07□□□□□ -1.92
DFFAO00273 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
DFFAO00273 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.07□□□□□ -1.92
DFFAO00273 AC093014.1-201ENST00000548926 724 ntBASIC3.07□□□□□ -1.92
DFFAO00273 CKS1BP1-201ENST00000555221 240 ntBASIC3.07□□□□□ -1.92
DFFAO00273 AC027104.1-201ENST00000563702 681 ntBASIC3.07□□□□□ -1.92
DFFAO00273 MTCYBP28-201ENST00000566728 1132 ntBASIC3.07□□□□□ -1.92
DFFAO00273 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.07□□□□□ -1.92
DFFAO00273 AC008687.2-201ENST00000597865 520 ntBASIC3.07□□□□□ -1.92
DFFAO00273 AC091488.1-201ENST00000604239 660 ntBASIC3.07□□□□□ -1.92
DFFAO00273 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.07□□□□□ -1.92
DFFAO00273 ATP5A1P2-202ENST00000616464 443 ntBASIC3.07□□□□□ -1.92
DFFAO00273 AC009487.2-201ENST00000420969 6821 ntBASIC3.07□□□□□ -1.92
DFFAO00273 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.07□□□□□ -1.92
DFFAO00273 ENSAP3-201ENST00000312710 333 ntBASIC3.06□□□□□ -1.92
DFFAO00273 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
DFFAO00273 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
DFFAO00273 DSTNP4-201ENST00000399472 474 ntBASIC3.06□□□□□ -1.92
DFFAO00273 AL138885.1-201ENST00000405921 675 ntBASIC3.06□□□□□ -1.92
DFFAO00273 MIR1250-201ENST00000408098 113 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms