Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MTCO1P56-201ENST00000401674 224 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 AL445189.1-201ENST00000405722 338 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 AC093578.1-201ENST00000415219 368 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.44□□□□□ -1.86
PDLIM1O00151 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.44□□□□□ -1.86
PDLIM1O00151 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.44□□□□□ -1.86
PDLIM1O00151 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.44□□□□□ -1.86
PDLIM1O00151 GTF2IP3-201ENST00000433887 494 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 GOT2P5-201ENST00000433995 546 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.44□□□□□ -1.86
PDLIM1O00151 AC092393.1-201ENST00000439625 742 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.44□□□□□ -1.86
PDLIM1O00151 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.44□□□□□ -1.86
PDLIM1O00151 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.44□□□□□ -1.86
PDLIM1O00151 OR9M1P-201ENST00000459641 921 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 AC146507.2-201ENST00000460608 476 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PDLIM1O00151 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.44□□□□□ -1.86
PDLIM1O00151 RNA5SP164-201ENST00000516533 110 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.44□□□□□ -1.86
PDLIM1O00151 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 AC022695.1-201ENST00000522089 237 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.44□□□□□ -1.86
PDLIM1O00151 LSM6P2-201ENST00000552208 177 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 AC106785.1-201ENST00000565935 262 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.44□□□□□ -1.86
PDLIM1O00151 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.44□□□□□ -1.86
PDLIM1O00151 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.44□□□□□ -1.86
PDLIM1O00151 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.44□□□□□ -1.86
PDLIM1O00151 AL451086.1-201ENST00000605596 223 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 AC092354.2-201ENST00000607786 514 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.44□□□□□ -1.86
PDLIM1O00151 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDLIM1O00151 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PDLIM1O00151 AL354798.1-201ENST00000622505 329 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 AL512506.2-201ENST00000624472 458 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.44□□□□□ -1.86
PDLIM1O00151 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.44□□□□□ -1.86
PDLIM1O00151 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDLIM1O00151 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.44□□□□□ -1.86
PDLIM1O00151 AC007656.2-201ENST00000624902 4547 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 DBF4P1-201ENST00000412976 1892 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM1O00151 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
PDLIM1O00151 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM1O00151 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM1O00151 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM1O00151 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM1O00151 RNU5E-10P-201ENST00000363506 118 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 RNU6-1066P-201ENST00000363573 105 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 SNORA7.2-201ENST00000364446 145 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 RNA5SP97-201ENST00000365006 84 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 SAR1AP2-201ENST00000392696 594 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 AL079342.2-201ENST00000403367 482 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 FCF1P2-201ENST00000415284 583 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 RPL7P46-201ENST00000425129 740 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 AC114973.1-201ENST00000429057 632 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM1O00151 AC244505.4-201ENST00000434905 287 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 SSXP5-201ENST00000443473 287 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 COX6CP18-201ENST00000448769 222 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 AC010301.1-201ENST00000473936 355 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 AC069528.1-202ENST00000482888 637 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 RPL31P13-201ENST00000484151 370 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM1O00151 IGKV2D-19-201ENST00000523346 262 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.43□□□□□ -1.86
PDLIM1O00151 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.43□□□□□ -1.86
PDLIM1O00151 AC092470.1-201ENST00000546187 132 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 TRAV15-201ENST00000556680 249 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.43□□□□□ -1.86
PDLIM1O00151 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.43□□□□□ -1.86
PDLIM1O00151 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.43□□□□□ -1.86
PDLIM1O00151 SNORD39.3-201ENST00000584451 71 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 OR4G1P-201ENST00000588632 938 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 BNIP3P39-201ENST00000601077 554 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 AL133393.1-201ENST00000603277 287 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 IGHV3-29-201ENST00000604817 344 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.43□□□□□ -1.86
PDLIM1O00151 AC068722.2-201ENST00000618734 544 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.43□□□□□ -1.86
PDLIM1O00151 AL391262.2-201ENST00000622466 494 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 FP236240.3-201ENST00000623061 327 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 AC104985.3-201ENST00000623479 597 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 AC010608.3-201ENST00000625048 527 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 MFSD8-245ENST00000641743 948 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.43□□□□□ -1.86
PDLIM1O00151 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM1O00151 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM1O00151 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PDLIM1O00151 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM1O00151 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PDLIM1O00151 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.43□□□□□ -1.86
PDLIM1O00151 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PDLIM1O00151 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM1O00151 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM1O00151 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms