Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC010625.1-201ENST00000511296 403 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC188H7C350 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC188H7C350 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC188H7C350 RNA5SP309-201ENST00000516670 106 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 RNU6-1073P-201ENST00000517182 106 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC188H7C350 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC188H7C350 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC188H7C350 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC188H7C350 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC188H7C350 SNORD84-203ENST00000584275 78 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC188H7C350 AL451074.6-201ENST00000608512 729 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 AC243773.3-201ENST00000613270 256 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 AC109809.1-201ENST00000619665 545 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 AC022149.2-201ENST00000621061 203 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC188H7C350 MIR1322-201ENST00000638013 71 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC188H7C350 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC188H7C350 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC188H7C350 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC188H7C350 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CCDC188H7C350 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC188H7C350 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC188H7C350 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC188H7C350 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC188H7C350 SNRPEP3-201ENST00000338402 276 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 RNU6-878P-201ENST00000384578 110 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC188H7C350 SOD2P1-201ENST00000396543 562 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 RPL21P65-201ENST00000406094 466 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 CRYBB2P1-203ENST00000415709 538 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AC012065.2-201ENST00000421295 375 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC188H7C350 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC188H7C350 RPL23AP74-201ENST00000437246 471 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC188H7C350 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC188H7C350 OR9M1P-201ENST00000459641 921 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AC084357.1-201ENST00000473404 255 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 TMED11P-201ENST00000479478 690 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AC114322.1-201ENST00000506771 926 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC188H7C350 HMGB1P28-201ENST00000507778 552 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AC109445.1-201ENST00000512356 383 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 RNU6-27P-201ENST00000516146 107 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 RNU2-27P-201ENST00000516185 142 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 NDUFB9P3-201ENST00000521269 501 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 OR5D17P-201ENST00000531492 978 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC188H7C350 AC011602.1-201ENST00000546484 331 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AC023161.2-201ENST00000551218 780 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 HIGD1AP17-201ENST00000554576 276 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC188H7C350 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC188H7C350 AL020997.2-201ENST00000602607 184 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AC009974.1-201ENST00000608881 455 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AC131235.4-201ENST00000609288 620 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AL391261.4-201ENST00000616012 481 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC188H7C350 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC188H7C350 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC188H7C350 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC188H7C350 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
CCDC188H7C350 MIR7153-201ENST00000637758 57 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 AP001350.1-201ENST00000601906 1524 ntBASIC3.79□□□□□ -1.8
CCDC188H7C350 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC188H7C350 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC188H7C350 FAM91A3P-201ENST00000456826 2544 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC188H7C350 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC188H7C350 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC188H7C350 AL583834.1-201ENST00000406943 343 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 SNORA3.3-201ENST00000408712 125 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC188H7C350 RPS7P15-201ENST00000415804 584 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC188H7C350 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC188H7C350 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC188H7C350 AC006548.1-201ENST00000427470 102 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AL035246.1-201ENST00000433554 1255 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC188H7C350 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC188H7C350 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC188H7C350 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC188H7C350 RPS3AP46-201ENST00000448352 682 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AC010655.1-201ENST00000449336 292 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 SLC31A1P1-201ENST00000451221 567 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AC026410.2-201ENST00000460281 156 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 RPL9P32-201ENST00000464118 620 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC188H7C350 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC188H7C350 AC010285.1-201ENST00000470580 392 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AC103987.1-201ENST00000473394 348 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 FAM172BP-201ENST00000487497 1089 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AC068305.1-201ENST00000497406 726 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms