Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 GOT2P5-201ENST00000433995 546 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 MUPP-201ENST00000438111 566 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 PTGES3P1-201ENST00000439531 483 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 MTCYBP42-201ENST00000444653 1130 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 OR2AF1P-201ENST00000454899 889 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC087312.1-201ENST00000471411 480 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC091167.1-201ENST00000492017 396 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 COX7A2P2-201ENST00000505291 250 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 FABP5P12-201ENST00000515543 389 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 MIR2276-201ENST00000516886 89 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AP006245.1-201ENST00000522549 120 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 FAM60DP-201ENST00000524174 632 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 OR5AK1P-201ENST00000524837 922 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 BNIP3P5-201ENST00000562290 498 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC138915.2-201ENST00000569776 97 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AL606490.9-201ENST00000603331 271 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 MIR6862-1-201ENST00000613016 70 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 MIR6862-2-201ENST00000614755 70 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AL079305.1-201ENST00000623159 3008 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 ZNF542P-204ENST00000482727 1305 ntBASIC2.62□□□□□ -1.99
SMKR1H3BMG3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SMKR1H3BMG3 AC103988.1-201ENST00000566382 2177 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 TAB3P1-202ENST00000452645 1634 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 OR4G11P-202ENST00000642116 1414 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 Y_RNA.25-201ENST00000362528 102 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 RNVU1-6-201ENST00000364688 164 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 RNU6-398P-201ENST00000384143 109 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 MIR493-201ENST00000385254 89 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 RNU6-882P-201ENST00000391025 103 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 RPS4XP3-201ENST00000398541 413 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 RPL7P46-201ENST00000425129 740 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC006466.1-201ENST00000438721 289 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 MTCYBP11-201ENST00000447254 1109 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AL590664.1-201ENST00000448065 339 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC112492.1-201ENST00000449607 712 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 HMGB3P8-201ENST00000449709 577 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC104472.2-201ENST00000469035 601 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC074386.1-201ENST00000476560 767 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 RPL30P14-201ENST00000482744 348 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 OR4G11P-201ENST00000492842 939 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 HMGN1P15-201ENST00000513870 295 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AP001636.2-201ENST00000525517 696 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 NDUFS5P6-201ENST00000529136 295 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 CR383656.7-201ENST00000548164 174 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC125611.1-201ENST00000549563 229 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 MIR5708-201ENST00000579723 85 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AL031176.1-201ENST00000604554 466 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC006077.1-201ENST00000604746 343 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 BNIP3P19-201ENST00000605397 577 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC124016.2-201ENST00000610058 665 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC100827.5-201ENST00000615883 426 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 AC022509.4-201ENST00000621404 572 ntBASIC2.61□□□□□ -1.99
SMKR1H3BMG3 ZNF826P-207ENST00000622273 1910 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms