Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AL020997.3-201ENST00000602843 359 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 MTND3P19-201ENST00000603825 345 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC073657.2-201ENST00000605661 303 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 SNORA51-201ENST00000606420 132 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AL158163.2-201ENST00000619110 700 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 CR392039.4-201ENST00000624968 501 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 U6.98-201ENST00000637157 84 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC013437.2-201ENST00000639587 677 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 BX649567.1-201ENST00000642071 1134 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 SEPT7P7-201ENST00000420492 1301 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 ZNF33CP-201ENST00000432492 2030 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 RPL23AP57-201ENST00000332361 466 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 SNORA71.3-201ENST00000362582 128 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 SNORA72.3-201ENST00000365074 132 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 RNU2-6P-201ENST00000411404 190 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 BTF3P8-201ENST00000414577 526 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC063979.1-201ENST00000415539 377 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC027644.1-201ENST00000419595 298 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 CBX1P4-201ENST00000439415 457 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 TPMTP4-201ENST00000450749 678 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AL035407.2-201ENST00000454090 378 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 PRDX3P4-201ENST00000470828 747 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 MTCO3P35-201ENST00000485582 781 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC118282.1-201ENST00000506408 765 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC119751.1-201ENST00000513357 765 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 RNU6-416P-201ENST00000516265 103 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC011611.5-201ENST00000552477 578 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 ZNF192P1-203ENST00000565888 810 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC010735.1-201ENST00000567305 1026 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC115085.1-201ENST00000588924 229 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 RNU4-5P-201ENST00000607255 135 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC093673.2-201ENST00000609674 331 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AL354976.1-201ENST00000613843 387 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC009464.1-201ENST00000615731 469 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC023510.2-201ENST00000622162 746 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC006065.5-201ENST00000623427 349 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AC104985.3-201ENST00000623479 597 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 AL590396.4-201ENST00000636779 956 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 MTND5P19-201ENST00000424872 1794 ntBASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM49D1C9J1S8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC119744.1-201ENST00000454746 1715 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC092326.2-201ENST00000624772 1561 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC008264.2-201ENST00000610193 3731 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 METTL21EP-201ENST00000298105 713 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 MIR449B-201ENST00000384995 97 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 USP9YP21-201ENST00000420603 432 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC069157.1-201ENST00000421749 137 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AL031736.2-201ENST00000426573 787 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC091286.1-201ENST00000431233 461 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC108734.1-201ENST00000439549 399 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AL929288.2-201ENST00000446368 407 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms