Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 MIRLET7G-201ENST00000362280 84 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 MIR483-201ENST00000385070 76 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 AL139095.1-201ENST00000404326 391 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 AF274854.1-201ENST00000413236 615 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 RPL23AP83-201ENST00000434984 473 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 CR769767.1-201ENST00000436337 346 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 AC104849.1-201ENST00000462623 405 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 ACTR6P1-201ENST00000514311 1104 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 RNU4-29P-201ENST00000515943 174 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 AC083899.3-201ENST00000603413 594 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 AC131902.3-201ENST00000611767 581 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 C2orf27A-204ENST00000623058 969 ntBASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.12□□□□□ -2.07
CPSF4LA6NMK7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 RNU1-138P-201ENST00000384093 164 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 RN7SKP140-201ENST00000411196 284 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 TRGV5P-201ENST00000419915 354 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 AC106901.1-201ENST00000425086 698 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 RPL34P26-201ENST00000445636 354 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 AC005002.1-201ENST00000447458 540 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 AC090071.1-201ENST00000507713 644 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 AP000889.2-201ENST00000532684 490 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 AC006023.1-201ENST00000603944 259 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 AC007423.1-201ENST00000605009 627 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 AC005336.3-201ENST00000623833 2679 ntBASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CPSF4LA6NMK7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 AL031679.1-201ENST00000400616 525 ntBASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 U3.37-201ENST00000408528 213 ntBASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 RNA5SP24-201ENST00000516478 95 ntBASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 MIR6766-201ENST00000622641 72 ntBASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 AP003485.2-201ENST00000623636 610 ntBASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CPSF4LA6NMK7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 ATG3P1-201ENST00000419507 911 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AC005517.2-201ENST00000424673 553 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AC022431.1-201ENST00000450941 438 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AC126389.1-201ENST00000477436 290 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AC004924.1-201ENST00000480160 781 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AL024509.2-201ENST00000493462 493 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 RN7SL636P-201ENST00000497504 294 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AC005921.1-201ENST00000510589 286 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 RN7SKP282-201ENST00000516824 299 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 PRELID2P1-201ENST00000552837 301 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms