Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AC010625.1-201ENST00000511296 403 ntBASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AF279873.1-201ENST00000523393 313 ntBASIC1.66□□□□□ -2.14
LINC01546A6NGU7 SMARCE1P4-201ENST00000523647 241 ntBASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AL121603.1-201ENST00000553815 142 ntBASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 RPL23AP84-201ENST00000571193 464 ntBASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AC010620.2-201ENST00000600135 313 ntBASIC1.66□□□□□ -2.14
LINC01546A6NGU7 MIR378J-201ENST00000611988 109 ntBASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AL161637.1-201ENST00000622380 412 ntBASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AP000676.4-201ENST00000624659 623 ntBASIC1.66□□□□□ -2.14
LINC01546A6NGU7 AL160394.1-201ENST00000624765 724 ntBASIC1.66□□□□□ -2.14
LINC01546A6NGU7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 MTCO1P24-201ENST00000515438 1558 ntBASIC1.66□□□□□ -2.14
LINC01546A6NGU7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01546A6NGU7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 OR5H15-201ENST00000383696 930 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 UBE2V1P1-201ENST00000430836 445 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 CASP3P1-201ENST00000446037 609 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 SSXP4-201ENST00000451349 245 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 RNU6-717P-201ENST00000459076 104 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 XKRY-201ENST00000510392 1100 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 RPL7L1P13-201ENST00000511702 739 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 SNORA31.1-201ENST00000515993 133 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 SNORA31.5-201ENST00000516190 133 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 HMGB1P23-201ENST00000518743 568 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 MIR5002-201ENST00000584713 97 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 ELOCP35-201ENST00000604289 336 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AC090953.1-201ENST00000604305 1092 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AC010680.4-201ENST00000605334 543 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AL159169.3-201ENST00000608871 561 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 MIR6766-201ENST00000622641 72 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AL122126.1-201ENST00000546905 1318 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 AL136520.1-201ENST00000600311 1322 ntBASIC1.65□□□□□ -2.15
LINC01546A6NGU7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01546A6NGU7 MTND4P34-201ENST00000572715 1371 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 RNU1-85P-201ENST00000364127 164 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.64□□□□□ -2.15
LINC01546A6NGU7 MIR554-201ENST00000384874 96 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AC240504.1-201ENST00000395709 845 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AL359511.1-201ENST00000402970 211 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AL356057.2-201ENST00000403318 432 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 RNA5SP338-201ENST00000410495 85 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01546A6NGU7 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AL135938.1-201ENST00000443141 297 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AC093663.2-201ENST00000484625 313 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 LINC00888-204ENST00000487386 421 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.64□□□□□ -2.15
LINC01546A6NGU7 RN7SKP24-201ENST00000515888 284 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 RN7SKP157-201ENST00000516174 282 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 SNORD59.2-201ENST00000516873 68 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 RNU1-45P-201ENST00000517191 141 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 SUB1P1-201ENST00000524415 382 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01546A6NGU7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
LINC01546A6NGU7 NOP56P3-201ENST00000549457 385 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 MIR5007-201ENST00000583098 95 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AC093227.2-201ENST00000589357 285 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AC121761.2-201ENST00000617300 689 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AP003400.2-201ENST00000624036 666 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 MTCO1P8-201ENST00000416914 1523 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01546A6NGU7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01546A6NGU7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01546A6NGU7 AC002546.1-201ENST00000588041 2504 ntBASIC1.64□□□□□ -2.15
LINC01546A6NGU7 ZNF833P-201ENST00000424938 1494 ntBASIC1.63□□□□□ -2.15
LINC01546A6NGU7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
LINC01546A6NGU7 RNA5SP374-201ENST00000362939 125 ntBASIC1.63□□□□□ -2.15
LINC01546A6NGU7 RNA5SP138-201ENST00000365098 114 ntBASIC1.63□□□□□ -2.15
LINC01546A6NGU7 RNU4-52P-201ENST00000384209 138 ntBASIC1.63□□□□□ -2.15
LINC01546A6NGU7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
LINC01546A6NGU7 METTL5-204ENST00000409340 472 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC01546A6NGU7 RN7SKP27-201ENST00000410684 333 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms