Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 RNY4P28-201ENST00000365281 93 ntBASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 AC112187.1-201ENST00000455837 479 ntBASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 AC087190.1-201ENST00000484462 480 ntBASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 AC107032.1-201ENST00000485945 480 ntBASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 RPL23AP40-201ENST00000487630 390 ntBASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 SNORA43.3-201ENST00000517240 103 ntBASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 IGLV3-30-201ENST00000524362 298 ntBASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 AP005639.1-201ENST00000526939 192 ntBASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 AC018552.1-201ENST00000562099 811 ntBASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 MIR4300-201ENST00000581016 96 ntBASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC61Q9Y6R9 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 OR2AT2P-201ENST00000413438 905 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 NME1P1-201ENST00000420914 382 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AC099677.3-201ENST00000427081 395 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 Z75746.1-201ENST00000440243 2080 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AL163193.1-201ENST00000444895 788 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 RPL23AP81-201ENST00000455252 467 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 TRBV26-201ENST00000456572 344 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AC093853.1-201ENST00000515689 483 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AC087360.1-201ENST00000518788 616 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 IGHVII-53-1-201ENST00000519538 255 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AC093023.1-201ENST00000547375 507 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AC027288.2-201ENST00000553028 243 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 VN1R84P-201ENST00000593697 235 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AL109809.4-201ENST00000603520 2185 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AC007619.2-201ENST00000605743 379 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 HSPE1P14-201ENST00000605812 302 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AL139099.4-201ENST00000614802 114 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AL596245.1-201ENST00000618994 362 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 MIR6719-201ENST00000622428 87 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AL136313.1-201ENST00000624804 202 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 MIR4679-1-201ENST00000637619 75 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 AC022031.1-201ENST00000585985 2593 ntBASIC8.16□□□□□ -1.1
CCDC61Q9Y6R9 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 LINC02555-201ENST00000563933 1951 ntBASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 RNU6-1298P-201ENST00000362456 101 ntBASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 Y_RNA.439-201ENST00000384119 94 ntBASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 RNU6-658P-201ENST00000384606 106 ntBASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 AC092423.1-201ENST00000430165 186 ntBASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 RN7SL352P-201ENST00000466002 277 ntBASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 OR51K1P-201ENST00000510214 950 ntBASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 AC063949.1-201ENST00000552900 865 ntBASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 AL049794.2-201ENST00000616301 365 ntBASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC61Q9Y6R9 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC8.15□□□□□ -1.11
CCDC61Q9Y6R9 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CCDC61Q9Y6R9 AP000560.1-201ENST00000624150 1937 ntBASIC8.15□□□□□ -1.11
CCDC61Q9Y6R9 OSBPL9P4-201ENST00000371707 1800 ntBASIC8.15□□□□□ -1.11
CCDC61Q9Y6R9 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CCDC61Q9Y6R9 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms