Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC239868.2-201ENST00000564237 4527 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 Y_RNA.60-201ENST00000362831 98 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 RNU6-61P-201ENST00000365528 109 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 RPS3AP2-201ENST00000407190 754 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 HMGN1P24-201ENST00000412282 298 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 NME1P1-201ENST00000420914 382 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 SDAD1P3-201ENST00000427380 333 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 RPS29P14-201ENST00000431518 171 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 RPS15AP10-201ENST00000432472 382 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 MTND5P15-201ENST00000434246 349 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AL590399.4-201ENST00000436561 601 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 H3F3BP1-201ENST00000440551 403 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AL445665.1-202ENST00000452436 324 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC104472.2-201ENST00000469035 601 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 RPS17P15-201ENST00000475609 349 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC009120.1-201ENST00000493458 473 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC079600.1-201ENST00000550326 297 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 HMGB3P26-201ENST00000560051 582 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC096996.1-201ENST00000563813 325 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC006115.2-201ENST00000596823 202 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 IGHV3-29-201ENST00000604817 344 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC104695.2-201ENST00000605056 775 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 SNORD58B-201ENST00000607313 66 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AL445363.3-201ENST00000623080 671 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 TPTE2P4-201ENST00000258589 1605 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AC233263.6-201ENST00000631132 1963 ntBASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGC4Q9Y5F7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC007842.1-201ENST00000597336 2039 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 BDP1P-201ENST00000582658 1990 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC235565.1-201ENST00000456962 1325 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AL159987.1-201ENST00000347911 293 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 MIR375-201ENST00000362103 64 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 SNORA70.9-201ENST00000384370 135 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 MTCO2P33-201ENST00000402100 465 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AL136372.1-201ENST00000403060 228 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC016769.2-201ENST00000414815 475 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AL590632.1-201ENST00000424289 371 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 RPL12P16-201ENST00000431098 498 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 HIGD1AP11-201ENST00000438361 280 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 FRG2FP-204ENST00000453982 852 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC116533.1-201ENST00000459748 321 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC007998.1-201ENST00000474156 672 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 RN7SL214P-201ENST00000487317 265 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC114801.2-201ENST00000503825 781 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC105384.2-201ENST00000508433 640 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 MTND1P19-201ENST00000511780 315 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC021146.3-201ENST00000511911 260 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 TBCAP3-201ENST00000512475 312 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC093853.1-201ENST00000515689 483 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 SCARNA16.2-201ENST00000516520 172 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC021678.3-201ENST00000517893 476 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC022616.4-201ENST00000522985 181 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AL133481.2-203ENST00000607558 139 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AL352984.2-202ENST00000613699 155 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 CR392039.4-201ENST00000624968 501 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AC055839.1-201ENST00000634467 498 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 AL606534.2-204ENST00000635008 178 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms