Protein–RNA interactions for Protein: Q9Y385

UBE2J1, Ubiquitin-conjugating enzyme E2 J1, humanhuman

Predicted RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2J1Q9Y385 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 S100A11P1-201ENST00000477525 312 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 TMED11P-201ENST00000479478 690 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 RPL23AP72-201ENST00000492447 435 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AL139099.1-201ENST00000497398 403 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC010460.1-201ENST00000507087 466 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 RNA5SP497-201ENST00000516081 97 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 RNU6-201P-201ENST00000517100 61 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC007599.1-201ENST00000568688 1174 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC011487.3-201ENST00000593607 453 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AL365503.1-201ENST00000605247 905 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC055876.5-201ENST00000605667 259 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AL391813.2-201ENST00000609113 322 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AL355472.4-201ENST00000610233 626 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC016769.4-201ENST00000616893 535 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC112204.3-201ENST00000623822 332 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC099654.2-201ENST00000433031 1980 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 AC011460.1-201ENST00000636268 1834 ntBASIC4.05□□□□□ -1.76
UBE2J1Q9Y385 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 MTND5P26-201ENST00000426018 1752 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AL672167.1-203ENST00000641299 2975 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC008033.1-201ENST00000216407 1162 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 U8.3-201ENST00000363321 132 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 RNU1-83P-201ENST00000363426 164 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 U3.15-201ENST00000365398 212 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 RNU6-517P-201ENST00000384362 110 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 Y_RNA.582-201ENST00000391023 95 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 BX295541.1-201ENST00000417774 250 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC004690.1-201ENST00000418216 328 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AL589872.1-201ENST00000426602 288 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 OR2B8P-201ENST00000432841 938 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 Z80107.2-201ENST00000445127 392 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC000111.2-201ENST00000448200 210 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 RPL7AP6-201ENST00000477943 801 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC012170.1-201ENST00000495139 359 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 RN7SL558P-201ENST00000497468 299 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 Y_RNA.672-201ENST00000516289 104 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 RNU2-46P-201ENST00000517038 113 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AL356432.3-201ENST00000568952 465 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AL161729.4-201ENST00000604650 476 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 IGHV3-29-201ENST00000604817 344 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC010424.2-201ENST00000607594 443 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC068870.2-201ENST00000620635 389 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC012150.2-201ENST00000621300 544 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AL732618.1-201ENST00000623251 301 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 PISRT1-201ENST00000626175 531 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 AC099654.12-201ENST00000639868 649 ntBASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
UBE2J1Q9Y385 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
UBE2J1Q9Y385 AC009902.3-201ENST00000606235 2172 ntBASIC4.03□□□□□ -1.76
UBE2J1Q9Y385 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
UBE2J1Q9Y385 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms