Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 OR4G2P-202ENST00000641004 1759 ntBASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 AL512633.1-201ENST00000399931 655 ntBASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 VTA1P1-201ENST00000414044 866 ntBASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 AP000893.1-201ENST00000474462 794 ntBASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 AC011037.1-201ENST00000483964 558 ntBASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 GOLGA5P1-201ENST00000507317 980 ntBASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 AC044913.1-201ENST00000557200 430 ntBASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 AC046143.2-201ENST00000609789 160 ntBASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 CRYM-AS1-204ENST00000637983 556 ntBASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 ZNF542P-204ENST00000482727 1305 ntBASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 AC117529.2-201ENST00000512159 2068 ntBASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 SNORD114-1-201ENST00000362705 72 ntBASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 MTCO3P31-201ENST00000405526 789 ntBASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 AL512430.2-201ENST00000406786 339 ntBASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 OR2B8P-201ENST00000432841 938 ntBASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 RPL36AP51-201ENST00000487216 318 ntBASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 RN7SKP24-201ENST00000515888 284 ntBASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 RNA5SP380-201ENST00000517190 98 ntBASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 AADACP1-206ENST00000561502 1193 ntBASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 AC026634.1-201ENST00000634369 198 ntBASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHANK2Q9UPX8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 OR4G1P-202ENST00000641173 1788 ntBASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 RNU6-76P-201ENST00000384060 104 ntBASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 Y_RNA.466-201ENST00000384294 113 ntBASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 AL359511.1-201ENST00000402970 211 ntBASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 AC107081.1-201ENST00000414975 361 ntBASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 AL356806.1-201ENST00000422524 916 ntBASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 AL356320.1-201ENST00000429616 163 ntBASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 BTG3P1-201ENST00000435859 716 ntBASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 AL389895.1-201ENST00000554127 252 ntBASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 AC009063.1-201ENST00000563342 702 ntBASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 AC074140.1-201ENST00000621617 208 ntBASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 AC004925.1-201ENST00000624256 2706 ntBASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
SHANK2Q9UPX8 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 AC011816.1-201ENST00000441346 546 ntBASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 AL357520.1-201ENST00000441557 453 ntBASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 AL353705.4-201ENST00000449661 238 ntBASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 HMGN2P23-201ENST00000456759 269 ntBASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 AC126182.1-201ENST00000478134 357 ntBASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 AC234781.5-201ENST00000508429 271 ntBASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 PNPT1P2-201ENST00000456768 2050 ntBASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHANK2Q9UPX8 RPL9P7-201ENST00000330965 580 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 AL355379.1-201ENST00000405542 640 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 RN7SL297P-201ENST00000483161 293 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 NF1P10-201ENST00000613227 742 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 U4.3-201ENST00000621047 82 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 MIR137-201ENST00000385223 102 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 MIR1287-201ENST00000408492 90 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 RPL36AP21-201ENST00000490372 323 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 RN7SKP282-201ENST00000516824 299 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 CBX3P5-201ENST00000552017 521 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 HMGB3P26-201ENST00000560051 582 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 AC010620.2-201ENST00000600135 313 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 AL353997.5-201ENST00000618886 171 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 ADAM3A-203ENST00000461344 2157 ntBASIC3.79□□□□□ -1.8
SHANK2Q9UPX8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms