Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 OR55B1P-203ENST00000641518 2602 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 ANKRD26P2-201ENST00000445530 1710 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 TAB3P1-202ENST00000452645 1634 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 MFSD8-239ENST00000641590 2479 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 HSPE1P11-201ENST00000339579 310 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 Y_RNA.158-201ENST00000363651 101 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 Y_RNA.378-201ENST00000365652 113 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 Y_RNA.557-201ENST00000384680 107 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 MIR558-201ENST00000384920 94 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 MIR92A2-201ENST00000385299 75 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 RNU2-29P-201ENST00000410423 189 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 BX323014.1-201ENST00000412876 237 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AL590609.2-201ENST00000421430 368 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AL590233.1-201ENST00000430017 456 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AL583843.1-201ENST00000456070 346 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 PLGLA-201ENST00000465668 449 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AC116562.3-201ENST00000506136 177 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AC004980.4-201ENST00000513375 203 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 RNU6-764P-201ENST00000516396 105 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 HMGB1P19-201ENST00000517578 577 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AC068587.5-201ENST00000528506 175 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 OR4P1P-201ENST00000530808 1136 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AC011477.5-201ENST00000586571 259 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AC008745.1-201ENST00000604064 271 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AL157817.1-201ENST00000614264 790 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AC087385.3-201ENST00000620477 187 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 Z69720.2-201ENST00000624755 279 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 XPOTP1-201ENST00000443317 2398 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AC107027.3-201ENST00000565095 3473 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 RNA5SP123-201ENST00000363244 119 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 RPL23AP17-201ENST00000401064 499 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 MRPL42P3-201ENST00000401492 326 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 COX6B1P1-201ENST00000415962 213 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AC114482.1-201ENST00000418010 247 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AC016712.1-201ENST00000431088 378 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AC096775.1-201ENST00000437724 448 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AC108734.1-201ENST00000439549 399 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AL035666.1-201ENST00000446195 348 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 ELOCP24-201ENST00000456370 334 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AC004129.2-201ENST00000457229 287 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 SNRPFP3-201ENST00000457792 225 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 RPS27P27-201ENST00000498779 255 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 MTND4P7-201ENST00000523876 130 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AP002404.1-201ENST00000532005 451 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AC011487.3-201ENST00000593607 453 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 BNIP3P25-201ENST00000596023 559 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 AC073539.2-201ENST00000597113 165 ntBASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.72□□□□□ -1.33
ZC3H4Q9UPT8 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms