Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 OR11H5P-202ENST00000641612 1325 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 Y_RNA.436-201ENST00000384097 102 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 BTF3L4P1-201ENST00000413813 468 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AC092634.6-201ENST00000418558 192 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AC092647.1-201ENST00000420654 287 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 RPL31P54-201ENST00000429803 370 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AL513175.1-201ENST00000431492 780 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 ATP5HP2-201ENST00000433885 485 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 RPL23AP15-201ENST00000450202 459 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 RPL21P71-201ENST00000465598 459 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 RPL30P6-201ENST00000475925 342 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 TRBV12-2-201ENST00000489763 344 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AC005178.1-201ENST00000508392 440 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 SAP18P1-201ENST00000512058 390 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 RNA5SP164-201ENST00000516533 110 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 TRAV15-201ENST00000556680 249 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AC011260.1-201ENST00000578420 472 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 MIR5187-201ENST00000583479 76 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AC005332.6-201ENST00000613178 446 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AL136981.2-201ENST00000617319 734 ntBASIC4.05□□□□□ -1.76
SIX4Q9UIU6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AL356489.2-201ENST00000566968 3528 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC107982.1-201ENST00000507171 1300 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 RNU6-492P-201ENST00000363035 104 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC007066.1-201ENST00000392902 381 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 SNORA57.3-201ENST00000411095 141 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 PRELID3BP11-201ENST00000414230 479 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC010683.1-201ENST00000473673 378 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 RAP1BP2-201ENST00000478270 544 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC080014.1-201ENST00000496877 1201 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 UBE2CP3-201ENST00000502715 450 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC112198.1-201ENST00000505369 1220 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC109458.1-201ENST00000508858 316 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 SNORA48.10-201ENST00000516965 160 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC023632.4-201ENST00000517783 191 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 MIR4512-201ENST00000583257 77 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AL049634.3-201ENST00000604968 457 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC011939.3-201ENST00000613686 466 ntBASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX4Q9UIU6 AL139811.1-201ENST00000424779 2299 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms