Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 MOB1AP2-201ENST00000446060 614 ntBASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 AC068657.1-201ENST00000520807 306 ntBASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 AC010306.1-201ENST00000523223 1117 ntBASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 AC083899.3-201ENST00000603413 594 ntBASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 AC010680.4-201ENST00000605334 543 ntBASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 AC245100.7-201ENST00000609678 442 ntBASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 RMST_10.1-201ENST00000616309 154 ntBASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 MTCO1P4-201ENST00000520516 1409 ntBASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NPC1L1Q9UHC9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 AC138393.1-206ENST00000540997 1886 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 ZNF826P-207ENST00000622273 1910 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 RNA5SP27-201ENST00000363839 119 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 RNU4-27P-201ENST00000410889 139 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 AC092745.2-202ENST00000411880 369 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 AL139132.1-201ENST00000431587 344 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 MTCO1P43-201ENST00000431831 488 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 RPS7P5-201ENST00000441482 581 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 AC025750.2-201ENST00000442609 450 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 AC046144.1-201ENST00000478559 1853 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 RPL23AP44-201ENST00000482216 473 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 RPL21P47-201ENST00000483696 477 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 MTCO2P9-201ENST00000503214 694 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 U6.107-201ENST00000637108 79 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 AC132825.7-201ENST00000638744 335 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 FAM35BP-202ENST00000497389 3337 ntBASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPC1L1Q9UHC9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AC004944.1-201ENST00000517807 3059 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 SNORD56.4-201ENST00000363883 71 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 SNORA44-201ENST00000384584 132 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 UBE2V1P2-201ENST00000397758 440 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 RPS27P29-201ENST00000463110 252 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AC012170.1-201ENST00000495139 359 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 OR2A20P-203ENST00000498397 1268 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AC104108.1-201ENST00000509930 412 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 RN7SKP82-201ENST00000516786 223 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AC124283.4-201ENST00000581815 456 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 MIR4672-201ENST00000583126 81 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 NTAN1P1-201ENST00000603150 646 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 MIR8084-201ENST00000614105 89 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 FRG1HP-204ENST00000617940 757 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AL163051.2-201ENST00000618976 735 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 AC073569.3-201ENST00000619055 682 ntBASIC4.09□□□□□ -1.75
NPC1L1Q9UHC9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.09□□□□□ -1.76
NPC1L1Q9UHC9 ZNF542P-204ENST00000482727 1305 ntBASIC4.09□□□□□ -1.76
NPC1L1Q9UHC9 MFSD8-213ENST00000641134 1327 ntBASIC4.09□□□□□ -1.76
NPC1L1Q9UHC9 AL139811.1-201ENST00000424779 2299 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 AP003122.5-201ENST00000527668 3766 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 ENSAP3-201ENST00000312710 333 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 RNU1-140P-201ENST00000365040 165 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 SNORD6-201ENST00000365444 73 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 EI24P2-201ENST00000397776 1076 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 ATF1P1-201ENST00000406040 927 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 AC068135.1-201ENST00000446164 246 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 RPS17P11-201ENST00000474297 293 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 RN7SL429P-201ENST00000479090 223 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 RN7SL489P-201ENST00000486185 223 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 RN7SL327P-201ENST00000488659 223 ntBASIC4.08□□□□□ -1.76
NPC1L1Q9UHC9 AL035404.1-201ENST00000497982 568 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms