Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 MIR1264-201ENST00000616374 69 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC018816.2-201ENST00000621460 353 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC104446.1-201ENST00000613728 1321 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.09□□□□□ -1.92
TREX1Q9NSU2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
TREX1Q9NSU2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
TREX1Q9NSU2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
TREX1Q9NSU2 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC073055.1-201ENST00000456901 1621 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC103988.1-201ENST00000566382 2177 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AL035425.3-201ENST00000564206 4996 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 DEFB109C-201ENST00000382575 264 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 DEFB109B-201ENST00000382656 264 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 SNORD15B-201ENST00000384714 146 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 TATDN1P1-201ENST00000414123 891 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AL158156.1-201ENST00000422509 473 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC004865.1-201ENST00000442276 1003 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AL591503.2-201ENST00000442314 1005 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC068135.1-201ENST00000446164 246 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC016696.1-201ENST00000446949 318 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 RPL23AP15-201ENST00000450202 459 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 MRPL35P4-201ENST00000453682 566 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 RN7SL601P-201ENST00000471221 293 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AL024509.2-201ENST00000493462 493 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC005412.1-201ENST00000580812 1049 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC090312.2-201ENST00000582687 378 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC135178.6-201ENST00000605314 398 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC104307.1-201ENST00000616142 196 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 MIR6075-201ENST00000620782 95 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AL590396.2-201ENST00000636511 1041 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC083865.1-201ENST00000636634 831 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 AC117529.2-201ENST00000512159 2068 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.08□□□□□ -1.92
TREX1Q9NSU2 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 PABPC1P7-201ENST00000413177 1513 ntBASIC3.08□□□□□ -1.92
TREX1Q9NSU2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 RPL23AP57-201ENST00000332361 466 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 RNU6-252P-201ENST00000363232 107 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 RNVU1-14-201ENST00000384770 164 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 SNORD67-201ENST00000390833 111 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 RPL7P25-201ENST00000404151 721 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 UBE2V1P5-201ENST00000440070 405 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 RPS27P5-201ENST00000444247 244 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC093392.2-201ENST00000450682 337 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC126121.1-201ENST00000482313 553 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC008565.1-201ENST00000509046 885 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 RNU6-711P-201ENST00000517255 106 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC233266.2-201ENST00000567067 528 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 BNIP3P22-201ENST00000593399 556 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC125494.3-201ENST00000602759 455 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AL590240.3-201ENST00000621416 943 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC099506.2-201ENST00000623074 221 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC024595.1-201ENST00000623088 387 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 AC024341.1-201ENST00000526444 1552 ntBASIC3.07□□□□□ -1.92
TREX1Q9NSU2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TREX1Q9NSU2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 SNORA63.1-201ENST00000362493 131 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 SNORA54-201ENST00000384281 123 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 MIR7-3-201ENST00000384898 110 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 U3.19-201ENST00000390893 196 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms