Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CISHQ9NSE2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CISHQ9NSE2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CISHQ9NSE2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CISHQ9NSE2 AL161431.1-201ENST00000618966 4205 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CISHQ9NSE2 RNU6-7-201ENST00000364784 107 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 RNU6-8-201ENST00000365467 107 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.89□□□□□ -1.95
CISHQ9NSE2 AL360182.1-201ENST00000397433 468 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 SNORD88.1-201ENST00000408684 91 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CISHQ9NSE2 AC023347.2-201ENST00000433994 462 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 AC000041.1-201ENST00000439655 175 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 AC096576.1-201ENST00000489014 359 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 AC010265.1-201ENST00000513509 211 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 AC026801.2-201ENST00000515352 425 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.89□□□□□ -1.95
CISHQ9NSE2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.89□□□□□ -1.95
CISHQ9NSE2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.89□□□□□ -1.95
CISHQ9NSE2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.89□□□□□ -1.95
CISHQ9NSE2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.89□□□□□ -1.95
CISHQ9NSE2 AL845331.3-202ENST00000562856 261 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.89□□□□□ -1.95
CISHQ9NSE2 AL160281.1-201ENST00000605307 311 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 AL359715.4-201ENST00000606629 1436 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 AC117490.2-201ENST00000610042 594 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CISHQ9NSE2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CISHQ9NSE2 ZNF826P-207ENST00000622273 1910 ntBASIC2.89□□□□□ -1.95
CISHQ9NSE2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.89□□□□□ -1.95
CISHQ9NSE2 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 RNA5SP295-201ENST00000362655 121 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 MIR9-1-201ENST00000385198 89 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 SNORA48.8-201ENST00000391324 134 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 NDUFB4P4-201ENST00000404822 243 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 RNA5SP129-201ENST00000410276 118 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 RPL31P2-201ENST00000413849 377 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 AL157827.1-201ENST00000447622 132 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 OR7L1P-201ENST00000456181 380 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CISHQ9NSE2 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 RN7SKP244-201ENST00000516513 307 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 COX6CP8-201ENST00000522620 226 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 AC025857.1-201ENST00000525252 377 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 AC093014.1-201ENST00000548926 724 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 AL049874.4-201ENST00000557593 255 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 MIR3690-201ENST00000580266 75 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 AC011471.1-201ENST00000585766 187 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 ATP1B3P1-201ENST00000605365 821 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 AC005021.1-201ENST00000608730 355 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 MIR7106-201ENST00000612419 65 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 AC011472.4-201ENST00000615848 491 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 CR381653.2-201ENST00000624041 768 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.88□□□□□ -1.95
CISHQ9NSE2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CISHQ9NSE2 AC109315.1-201ENST00000584143 1347 ntBASIC2.88□□□□□ -1.95
CISHQ9NSE2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CISHQ9NSE2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CISHQ9NSE2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CISHQ9NSE2 TAB3P1-202ENST00000452645 1634 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 RNU6-244P-201ENST00000391028 104 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 RPL23AP47-201ENST00000408017 460 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 NDUFB4P5-201ENST00000415445 361 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 AC073508.1-201ENST00000428866 656 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 MTCYBP12-201ENST00000440559 1134 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 AL831737.1-201ENST00000441288 271 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 AC104629.2-201ENST00000468627 598 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CISHQ9NSE2 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 AL355836.1-201ENST00000555951 870 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 MTND4LP24-201ENST00000572277 291 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 VN1R90P-201ENST00000595717 726 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 VN1R92P-201ENST00000598511 928 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 AC243756.2-201ENST00000618406 463 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms