Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC104073.1-201ENST00000451988 151 ntBASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AC027673.1-201ENST00000456245 405 ntBASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 RPL21P41-201ENST00000459863 264 ntBASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 RN7SL297P-201ENST00000483161 293 ntBASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 RPS4XP14-201ENST00000493072 781 ntBASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AC105914.1-201ENST00000511798 226 ntBASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 RNU6-751P-201ENST00000516382 101 ntBASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 SNORA70.18-201ENST00000516696 98 ntBASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 BNIP3P4-201ENST00000604946 565 ntBASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AL163051.2-201ENST00000618976 735 ntBASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AC092650.2-201ENST00000619984 902 ntBASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 OR52H1-202ENST00000641796 1061 ntBASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VCX3AQ9NNX9 MTND5P31-201ENST00000419366 1374 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 AC025263.3-201ENST00000622965 1396 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 AP002907.1-201ENST00000606361 1430 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 RPL32P23-201ENST00000397237 405 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 MIR1178-201ENST00000408396 91 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 UBE2V1P11-201ENST00000411559 285 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 ATP5A1P2-201ENST00000412323 255 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 AL158825.1-201ENST00000414735 521 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 RPS7P15-201ENST00000415804 584 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 NDUFA12P1-201ENST00000455914 406 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 RN7SL385P-201ENST00000468873 276 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 AC015908.1-201ENST00000478739 476 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 GAPDHP39-201ENST00000481866 979 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 AC026979.1-201ENST00000492525 396 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 HMGN1P11-201ENST00000508668 303 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 AC022690.1-201ENST00000526681 550 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 AC090888.3-201ENST00000558917 509 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 U3.45-201ENST00000607547 219 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 CYCSP41-201ENST00000616920 296 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 AL121594.5-201ENST00000631724 573 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 MTND2P41-201ENST00000637599 773 ntBASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VCX3AQ9NNX9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 RNU1-85P-201ENST00000364127 164 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 RNU6-921P-201ENST00000384361 107 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 MTND4LP20-201ENST00000402379 270 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 RPS4XP9-201ENST00000405151 780 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 CR848007.2-201ENST00000424918 787 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 OR8F1P-201ENST00000425243 930 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 CEACAMP9-201ENST00000442990 513 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AL445669.2-201ENST00000454425 421 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC108729.2-201ENST00000476543 840 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC096751.1-202ENST00000502691 1067 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC022784.5-201ENST00000522241 437 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AP000857.1-201ENST00000532151 543 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC005476.1-201ENST00000554427 397 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 MIR4277-201ENST00000578298 84 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC022069.1-201ENST00000582910 658 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms