Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC013356.1-201ENST00000489027 564 ntBASIC5.2□□□□□ -1.58
RNF38Q9H0F5 AC023194.1-201ENST00000493084 308 ntBASIC5.2□□□□□ -1.58
RNF38Q9H0F5 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF38Q9H0F5 AC002456.2-201ENST00000509356 380 ntBASIC5.2□□□□□ -1.58
RNF38Q9H0F5 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF38Q9H0F5 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF38Q9H0F5 AL355375.2-201ENST00000574825 175 ntBASIC5.2□□□□□ -1.58
RNF38Q9H0F5 MIR4737-201ENST00000583979 81 ntBASIC5.2□□□□□ -1.58
RNF38Q9H0F5 AC018638.8-201ENST00000588755 281 ntBASIC5.2□□□□□ -1.58
RNF38Q9H0F5 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.2□□□□□ -1.58
RNF38Q9H0F5 AL133173.2-201ENST00000614270 90 ntBASIC5.2□□□□□ -1.58
RNF38Q9H0F5 MIR1302-1-201ENST00000637932 143 ntBASIC5.2□□□□□ -1.58
RNF38Q9H0F5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RNF38Q9H0F5 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF38Q9H0F5 AL138820.1-201ENST00000617901 5305 ntBASIC5.2□□□□□ -1.58
RNF38Q9H0F5 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RNF38Q9H0F5 SCARNA15-201ENST00000607520 4325 ntBASIC5.2□□□□□ -1.58
RNF38Q9H0F5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF38Q9H0F5 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF38Q9H0F5 AC024560.2-201ENST00000507981 1497 ntBASIC5.2□□□□□ -1.58
RNF38Q9H0F5 AC012618.3-205ENST00000637896 1496 ntBASIC5.2□□□□□ -1.58
RNF38Q9H0F5 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC025574.1-201ENST00000554784 1653 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 OR5J1P-201ENST00000313544 939 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 RNA5SP191-201ENST00000362585 102 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 RNA5SP443-201ENST00000363083 132 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 Y_RNA.132-201ENST00000363421 102 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 RNVU1-6-201ENST00000364688 164 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 MIR1305-201ENST00000408300 86 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 MTCO3P12-201ENST00000416718 547 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AL358176.3-201ENST00000420757 454 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC096632.1-201ENST00000427395 310 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 OR4F13P-201ENST00000428478 931 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 SEPT14P3-201ENST00000439401 183 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AL732372.2-207ENST00000445840 183 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AL591623.2-201ENST00000449978 222 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 SEPT14P2-201ENST00000453405 183 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC233279.1-201ENST00000455300 423 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 APOOP2-201ENST00000461561 539 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC087879.1-201ENST00000474343 374 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 RPL36AP51-201ENST00000487216 318 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC026427.2-201ENST00000506228 536 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 SEPT14P4-201ENST00000513445 186 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 RNU6-1045P-201ENST00000516321 107 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 RNA5SP392-201ENST00000516905 112 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC105029.1-201ENST00000520250 669 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 FO082796.1-201ENST00000523795 183 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC022690.1-201ENST00000526681 550 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC008127.2-201ENST00000549925 1075 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 SULT1C2P1-202ENST00000562418 459 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 VN1R80P-201ENST00000597126 338 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 Z98200.1-201ENST00000607298 470 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AP006248.2-201ENST00000623309 592 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC100810.6-201ENST00000638068 285 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 SOCS5P3-201ENST00000425115 1576 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 MTND5P28-201ENST00000438005 1594 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 AC090229.1-201ENST00000590983 1609 ntBASIC5.19□□□□□ -1.58
RNF38Q9H0F5 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF38Q9H0F5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF38Q9H0F5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF38Q9H0F5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF38Q9H0F5 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF38Q9H0F5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF38Q9H0F5 RNU6-984P-201ENST00000363236 109 ntBASIC5.18□□□□□ -1.58
RNF38Q9H0F5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF38Q9H0F5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF38Q9H0F5 SNORD115.1-201ENST00000391109 76 ntBASIC5.18□□□□□ -1.58
RNF38Q9H0F5 AL122016.1-201ENST00000403365 367 ntBASIC5.18□□□□□ -1.58
RNF38Q9H0F5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF38Q9H0F5 RN7SKP266-201ENST00000410232 287 ntBASIC5.18□□□□□ -1.58
RNF38Q9H0F5 RNA5SP118-201ENST00000410385 109 ntBASIC5.18□□□□□ -1.58
RNF38Q9H0F5 RPL12P9-201ENST00000412942 488 ntBASIC5.18□□□□□ -1.58
RNF38Q9H0F5 RPL26P29-201ENST00000415623 438 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms