Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC008885.1-201ENST00000514930 301 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 RNU6-1308P-201ENST00000516817 103 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 AC010928.3-201ENST00000587712 541 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 AC115085.1-201ENST00000588924 229 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 AC006539.2-201ENST00000601729 572 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 AL672296.1-201ENST00000427780 2158 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 AC022031.1-201ENST00000585985 2593 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 RNU6-670P-201ENST00000364312 104 ntBASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 RPL31P1-201ENST00000398116 372 ntBASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 DUTP6-201ENST00000425573 462 ntBASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AC009969.1-201ENST00000438726 172 ntBASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 RPL29P29-201ENST00000448725 423 ntBASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 C1DP3-201ENST00000455013 423 ntBASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 RPL31P13-201ENST00000484151 370 ntBASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 POU5F1P7-201ENST00000508759 541 ntBASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 PTGES3P3-201ENST00000511479 482 ntBASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AC090425.2-201ENST00000608818 501 ntBASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UPF3BQ9BZI7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 AL157700.1-201ENST00000561973 1432 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 AC008264.2-201ENST00000610193 3731 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 RNU4-31P-201ENST00000384211 141 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 U3.42-201ENST00000408746 214 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 RPL31P2-201ENST00000413849 377 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 DPPA2P1-201ENST00000428060 556 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 AC244505.4-201ENST00000434905 287 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 SSXP5-201ENST00000443473 287 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 RPL31P50-201ENST00000471002 296 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 AP000926.3-201ENST00000497201 299 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 AC110792.2-201ENST00000510278 224 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 COX6B1P6-201ENST00000522347 255 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 MIR3162-201ENST00000581818 82 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 MIR4435-1-201ENST00000582552 80 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 AC083760.1-201ENST00000589621 670 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 NF1P10-201ENST00000613227 742 ntBASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
UPF3BQ9BZI7 AL049737.1-201ENST00000413920 1403 ntBASIC3.53□□□□□ -1.85
UPF3BQ9BZI7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 HNRNPDP2-201ENST00000406475 478 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 RN7SKP220-201ENST00000410611 288 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 ARL5AP2-201ENST00000444698 533 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 AC091179.1-201ENST00000461606 579 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 RPL37P6-202ENST00000464216 403 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 AC090071.1-201ENST00000507713 644 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 AC093755.1-201ENST00000512950 1023 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 OR6C73P-201ENST00000546432 358 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 H3F3AP1-201ENST00000559984 334 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 MIR548Y-201ENST00000582739 110 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 AL033523.1-201ENST00000605153 153 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 HMGB1P51-201ENST00000605166 638 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 AC005156.1-201ENST00000613371 573 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 AC121761.2-201ENST00000617300 689 ntBASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 MIR6864-201ENST00000617935 70 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms