Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNA5SP339-201ENST00000390987 122 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 RNU6-908P-201ENST00000410160 94 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 SDCBPP3-201ENST00000419629 891 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AL354766.1-201ENST00000423396 542 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AL139148.1-201ENST00000427122 680 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 MTATP6P16-201ENST00000434543 526 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 OR52B5P-201ENST00000435337 951 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AC105399.1-202ENST00000447303 205 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AL359073.1-201ENST00000448036 403 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AC010285.1-201ENST00000470580 392 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AC004062.1-201ENST00000509926 645 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 RNA5SP92-201ENST00000516437 110 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 OR5AL2P-201ENST00000532185 920 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 CBX3P5-201ENST00000552017 521 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AC079075.1-201ENST00000559543 878 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AC006116.10-201ENST00000591836 581 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AC105254.2-201ENST00000603636 436 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AL049634.3-201ENST00000604968 457 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 RDM1-219ENST00000615378 542 ntTSL 3 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AL589994.2-201ENST00000621124 579 ntBASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRAIPQ9BWF2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.44
TRAIPQ9BWF2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
TRAIPQ9BWF2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 BCORP1-203ENST00000513194 5093 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 RNU6-76P-201ENST00000384060 104 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC097374.1-203ENST00000400783 485 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 RNU6-373P-201ENST00000411247 98 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 RPL7L1P10-201ENST00000427790 463 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AL359265.2-201ENST00000434367 631 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 RPL21P112-201ENST00000434403 463 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC024082.2-201ENST00000434771 238 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 MTND1P18-201ENST00000448191 573 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 RPL23AP2-201ENST00000471227 466 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 S100A11P1-201ENST00000477525 312 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AL163973.1-201ENST00000484753 577 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 HIGD1AP14-201ENST00000507617 282 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 RNA5SP503-201ENST00000517047 117 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 ERHP1-201ENST00000523006 310 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AF235103.2-201ENST00000525753 346 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 RPL23AP84-201ENST00000571193 464 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC060780.3-201ENST00000589464 80 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 SDR42E1P2-201ENST00000614861 481 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC079684.1-201ENST00000621405 437 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC024940.5-201ENST00000622889 474 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC067931.1-201ENST00000624190 671 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AL353662.3-201ENST00000625131 237 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC006065.6-201ENST00000625201 545 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 C4BPAP1-201ENST00000415474 1893 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 GVINP1-202ENST00000531871 7271 ntBASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRAIPQ9BWF2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 RN7SKP185-201ENST00000362813 326 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 SNORA72.1-201ENST00000363485 129 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms