Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC007566.2-201ENST00000603642 413 ntBASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 AL022099.1-201ENST00000604551 712 ntBASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 AC010632.3-201ENST00000611377 369 ntBASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 AC109309.2-201ENST00000612597 332 ntBASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 AL159972.1-201ENST00000625150 448 ntBASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TRIM56Q9BRZ2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AC083899.1-201ENST00000454465 3819 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 SAGE2P-201ENST00000420011 2126 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 OR1S2-201ENST00000302592 978 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 OR52B3P-201ENST00000314715 928 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 Y_RNA.373-201ENST00000365600 103 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 Y_RNA.395-201ENST00000383945 109 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AL049697.2-201ENST00000403708 294 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AL606923.1-201ENST00000406616 190 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 RNA5SP178-201ENST00000410380 128 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 RNU2-39P-201ENST00000410604 198 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AL161631.1-201ENST00000417933 486 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 RNU7-152P-201ENST00000458982 64 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 ACA64.1-201ENST00000459171 127 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AL049714.1-201ENST00000466686 347 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AC126389.1-201ENST00000477436 290 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AL139099.1-201ENST00000497398 403 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AC004062.1-201ENST00000509926 645 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 SNORA70.11-201ENST00000515987 138 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 SNORA70.13-201ENST00000516116 138 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 COX6CP7-201ENST00000597056 208 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AP000769.2-201ENST00000602344 396 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 APOOP1-201ENST00000604695 592 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AC244100.1-202ENST00000621554 382 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 NXPH1-205ENST00000602349 1953 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 THAP12P4-201ENST00000528321 2266 ntBASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TRIM56Q9BRZ2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 RNU5E-8P-201ENST00000363502 116 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 RNU6-196P-201ENST00000384315 107 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 HMGB1P20-201ENST00000402555 677 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 RNU2-15P-201ENST00000410692 191 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AL035660.1-201ENST00000422041 222 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AL451142.2-201ENST00000429076 2090 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AL353597.2-202ENST00000434901 373 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AL161636.2-201ENST00000445179 927 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 RNU7-182P-201ENST00000459009 62 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 RPS4XP10-201ENST00000465034 731 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC022034.3-201ENST00000471393 478 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC022215.1-201ENST00000481770 362 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC008758.3-201ENST00000507003 1829 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms