Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
IFT140Q96RY7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.15□□□□□ -1.74
IFT140Q96RY7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
IFT140Q96RY7 AL354710.1-201ENST00000453641 246 ntBASIC4.15□□□□□ -1.75
IFT140Q96RY7 TRBV1-201ENST00000476502 284 ntBASIC4.15□□□□□ -1.75
IFT140Q96RY7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
IFT140Q96RY7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.15□□□□□ -1.75
IFT140Q96RY7 RNA5SP281-201ENST00000516504 135 ntBASIC4.15□□□□□ -1.75
IFT140Q96RY7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
IFT140Q96RY7 AP001317.1-201ENST00000531194 960 ntBASIC4.15□□□□□ -1.75
IFT140Q96RY7 OR8L1P-201ENST00000534005 955 ntBASIC4.15□□□□□ -1.75
IFT140Q96RY7 HMGB3P26-201ENST00000560051 582 ntBASIC4.15□□□□□ -1.75
IFT140Q96RY7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.15□□□□□ -1.75
IFT140Q96RY7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
IFT140Q96RY7 AP000942.3-201ENST00000603702 160 ntBASIC4.15□□□□□ -1.75
IFT140Q96RY7 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.15□□□□□ -1.75
IFT140Q96RY7 AC095050.2-201ENST00000510748 1458 ntBASIC4.15□□□□□ -1.75
IFT140Q96RY7 AC026523.2-201ENST00000625039 7739 ntBASIC4.14□□□□□ -1.75
IFT140Q96RY7 AC022336.2-201ENST00000568966 2538 ntBASIC4.14□□□□□ -1.75
IFT140Q96RY7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
IFT140Q96RY7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
IFT140Q96RY7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
IFT140Q96RY7 RN7SL499P-201ENST00000481141 276 ntBASIC4.14□□□□□ -1.75
IFT140Q96RY7 AC016687.1-201ENST00000482574 353 ntBASIC4.14□□□□□ -1.75
IFT140Q96RY7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.14□□□□□ -1.75
IFT140Q96RY7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.14□□□□□ -1.75
IFT140Q96RY7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.14□□□□□ -1.75
IFT140Q96RY7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.14□□□□□ -1.75
IFT140Q96RY7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
IFT140Q96RY7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
IFT140Q96RY7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.13□□□□□ -1.75
IFT140Q96RY7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
IFT140Q96RY7 VDAC1P3-201ENST00000434069 851 ntBASIC4.13□□□□□ -1.75
IFT140Q96RY7 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.13□□□□□ -1.75
IFT140Q96RY7 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.13□□□□□ -1.75
IFT140Q96RY7 AC093278.1-201ENST00000494700 600 ntBASIC4.13□□□□□ -1.75
IFT140Q96RY7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.13□□□□□ -1.75
IFT140Q96RY7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.13□□□□□ -1.75
IFT140Q96RY7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.13□□□□□ -1.75
IFT140Q96RY7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.13□□□□□ -1.75
IFT140Q96RY7 AC104237.2-201ENST00000612456 443 ntBASIC4.13□□□□□ -1.75
IFT140Q96RY7 AC110994.2-201ENST00000635481 492 ntBASIC4.13□□□□□ -1.75
IFT140Q96RY7 AL021368.2-201ENST00000606125 5352 ntBASIC4.13□□□□□ -1.75
IFT140Q96RY7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
IFT140Q96RY7 AC087565.3-202ENST00000642085 1603 ntBASIC4.13□□□□□ -1.75
IFT140Q96RY7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
IFT140Q96RY7 RNU1-100P-201ENST00000365255 165 ntBASIC4.12□□□□□ -1.75
IFT140Q96RY7 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.12□□□□□ -1.75
IFT140Q96RY7 AC107222.1-201ENST00000510899 637 ntBASIC4.12□□□□□ -1.75
IFT140Q96RY7 RNU6-1231P-201ENST00000517185 103 ntBASIC4.12□□□□□ -1.75
IFT140Q96RY7 AC008121.2-201ENST00000614647 523 ntBASIC4.12□□□□□ -1.75
IFT140Q96RY7 CR381653.2-201ENST00000624041 768 ntBASIC4.12□□□□□ -1.75
IFT140Q96RY7 AC093775.1-201ENST00000624154 1868 ntBASIC4.12□□□□□ -1.75
IFT140Q96RY7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
IFT140Q96RY7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
IFT140Q96RY7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.12□□□□□ -1.75
IFT140Q96RY7 Y_RNA.338-201ENST00000365320 114 ntBASIC4.11□□□□□ -1.75
IFT140Q96RY7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
IFT140Q96RY7 RPL23AP45-201ENST00000476406 468 ntBASIC4.11□□□□□ -1.75
IFT140Q96RY7 RPL23AP70-201ENST00000483361 460 ntBASIC4.11□□□□□ -1.75
IFT140Q96RY7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.11□□□□□ -1.75
IFT140Q96RY7 AC026464.5-201ENST00000562497 722 ntBASIC4.11□□□□□ -1.75
IFT140Q96RY7 RPL23AP84-201ENST00000571193 464 ntBASIC4.11□□□□□ -1.75
IFT140Q96RY7 AP001004.1-201ENST00000582468 324 ntBASIC4.11□□□□□ -1.75
IFT140Q96RY7 AL020991.1-201ENST00000612314 373 ntBASIC4.11□□□□□ -1.75
IFT140Q96RY7 AC004825.2-201ENST00000616634 455 ntBASIC4.11□□□□□ -1.75
IFT140Q96RY7 WARS-244ENST00000627608 123 ntTSL 5 BASIC4.11□□□□□ -1.75
IFT140Q96RY7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
IFT140Q96RY7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
IFT140Q96RY7 RNU6-1159P-201ENST00000362933 107 ntBASIC4.11□□□□□ -1.75
IFT140Q96RY7 Y_RNA.164-201ENST00000363709 102 ntBASIC4.11□□□□□ -1.75
IFT140Q96RY7 RNU1-87P-201ENST00000363727 170 ntBASIC4.11□□□□□ -1.75
IFT140Q96RY7 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
IFT140Q96RY7 UBE2V2P4-201ENST00000447495 259 ntBASIC4.11□□□□□ -1.75
IFT140Q96RY7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.11□□□□□ -1.75
IFT140Q96RY7 AL353743.4-201ENST00000422653 1547 ntBASIC4.1□□□□□ -1.75
IFT140Q96RY7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
IFT140Q96RY7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.1□□□□□ -1.75
IFT140Q96RY7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.1□□□□□ -1.75
IFT140Q96RY7 RNU6-805P-201ENST00000365643 106 ntBASIC4.1□□□□□ -1.75
IFT140Q96RY7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
IFT140Q96RY7 OR9N1P-201ENST00000491296 333 ntBASIC4.1□□□□□ -1.75
IFT140Q96RY7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.1□□□□□ -1.75
IFT140Q96RY7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.1□□□□□ -1.75
IFT140Q96RY7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.1□□□□□ -1.75
IFT140Q96RY7 AC009318.2-201ENST00000610917 651 ntBASIC4.1□□□□□ -1.75
IFT140Q96RY7 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.1□□□□□ -1.75
IFT140Q96RY7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
IFT140Q96RY7 DCAF13P3-201ENST00000561147 1334 ntBASIC4.09□□□□□ -1.75
IFT140Q96RY7 AC007342.7-201ENST00000624610 2337 ntBASIC4.09□□□□□ -1.75
IFT140Q96RY7 Z73965.1-201ENST00000623412 2297 ntBASIC4.09□□□□□ -1.75
IFT140Q96RY7 MIR137-201ENST00000385223 102 ntBASIC4.09□□□□□ -1.75
IFT140Q96RY7 SNORA79B-201ENST00000410557 148 ntBASIC4.09□□□□□ -1.75
IFT140Q96RY7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.09□□□□□ -1.75
IFT140Q96RY7 RN7SL442P-201ENST00000473804 320 ntBASIC4.09□□□□□ -1.75
IFT140Q96RY7 AC092045.1-201ENST00000495716 1231 ntBASIC4.09□□□□□ -1.75
IFT140Q96RY7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.09□□□□□ -1.75
IFT140Q96RY7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.09□□□□□ -1.75
IFT140Q96RY7 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.09□□□□□ -1.75
IFT140Q96RY7 MIR1291-201ENST00000627649 87 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms