Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC233702.9-201ENST00000581528 203 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC090616.5-202ENST00000582111 297 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 FGF7P1-201ENST00000582820 288 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 C8orf59P2-201ENST00000603441 271 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC020910.2-201ENST00000603635 610 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AL365503.1-201ENST00000605247 905 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AC012150.2-201ENST00000621300 544 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AL161637.1-201ENST00000622380 412 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 U6.101-201ENST00000637707 76 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 AL391684.1-202ENST00000641293 1636 ntBASIC5.37□□□□□ -1.55
CHAMP1Q96JM3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 INTS6P1-201ENST00000504674 2530 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 Y_RNA.38-201ENST00000362617 102 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 RNY4P34-201ENST00000364779 95 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 RNU6-534P-201ENST00000364877 106 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AC068538.1-201ENST00000376856 336 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 ARF4P3-201ENST00000397387 509 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AC009237.10-201ENST00000414112 510 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 PIGFP2-201ENST00000421400 651 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 RAD23BP1-201ENST00000421404 1227 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AL589872.1-201ENST00000426602 288 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 ELOCP14-201ENST00000428070 331 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 ELOCP7-201ENST00000439968 331 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 MTND4LP16-201ENST00000440828 295 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 RPS29P25-201ENST00000481709 171 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 MTND1P3-201ENST00000484956 952 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AC034159.1-201ENST00000513885 583 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 RNU6-358P-201ENST00000516564 75 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 COX6CP8-201ENST00000522620 226 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AL157687.1-201ENST00000554853 619 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AL157394.1-201ENST00000562983 1224 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 RN7SL176P-201ENST00000580352 264 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AC005730.3-201ENST00000583067 366 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 RPL26P30-202ENST00000602923 645 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AC104260.1-201ENST00000616660 539 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AC068831.8-201ENST00000620171 435 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AC110994.2-201ENST00000635481 492 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 AL022578.1-201ENST00000439330 1433 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.36□□□□□ -1.55
CHAMP1Q96JM3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 CCT4P2-201ENST00000233836 1548 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 CASC19-280ENST00000642102 1351 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 Y_RNA.813-201ENST00000364639 102 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 RNVU1-6-201ENST00000364688 164 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 RNU6-343P-201ENST00000364709 104 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 RNU6-441P-201ENST00000384545 106 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 RPS20P2-201ENST00000402520 389 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 HDGFP1-201ENST00000405943 252 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 COX6B1P1-201ENST00000415962 213 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 RPL21P91-201ENST00000429231 479 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 RPEP2-201ENST00000432149 701 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 AC112498.1-201ENST00000444401 332 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 TPT1P14-201ENST00000448018 505 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 BX322784.1-201ENST00000455793 1077 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 AC022034.3-201ENST00000471393 478 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 AC006390.1-201ENST00000508068 283 ntBASIC5.35□□□□□ -1.55
CHAMP1Q96JM3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms