Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 AC006994.1-201ENST00000438212 839 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 AC021146.7-201ENST00000509604 775 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 AC025857.1-201ENST00000525252 377 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 OR4A45P-201ENST00000529954 901 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 CENPUP2-201ENST00000555897 1186 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 MTCO3P24-201ENST00000572729 782 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 MIR5004-201ENST00000579078 107 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 AC005021.1-201ENST00000608730 355 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 AC135507.2-201ENST00000612443 309 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 AL162274.2-201ENST00000614406 332 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 AC110774.1-201ENST00000623567 2018 ntBASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC112Q8NEF3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 SNORA7.2-201ENST00000364446 145 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 SNORA48.2-201ENST00000390926 124 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 HNRNPDP2-201ENST00000406475 478 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 HMGB1P12-201ENST00000438594 598 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 MED6P1-201ENST00000439659 713 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 RPL27AP5-201ENST00000469428 449 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 AL136126.1-201ENST00000473603 402 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 AC109925.1-201ENST00000478069 331 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 PRELID3BP6-201ENST00000503839 571 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 RNU6-1004P-201ENST00000516584 111 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 RN7SKP277-201ENST00000516895 283 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 AC067904.2-201ENST00000517322 1283 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 AL121594.4-201ENST00000556211 1196 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 MIR548Y-201ENST00000582739 110 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 AC005242.1-201ENST00000585658 438 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 AC117490.2-201ENST00000610042 594 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 AL590240.3-201ENST00000621416 943 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 Z82195.2-201ENST00000612348 18351 ntBASIC3.22□□□□□ -1.89
CCDC112Q8NEF3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 MTND4P13-201ENST00000402078 1023 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 TOMM22P1-201ENST00000418578 312 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AL445528.1-201ENST00000426330 420 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 RPL21P112-201ENST00000434403 463 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 RSL24D1P2-201ENST00000445584 366 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AL157827.1-201ENST00000447622 132 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AL590639.1-201ENST00000456484 337 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AP001992.1-205ENST00000462248 379 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 RN7SL863P-201ENST00000462370 296 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AC098799.1-201ENST00000504752 800 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 SNRPGP15-201ENST00000600149 222 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AL392112.1-201ENST00000605115 829 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AC131902.3-201ENST00000611767 581 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 FRG1DP-201ENST00000635586 771 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AC139713.2-210ENST00000641741 992 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 MTND4P34-201ENST00000572715 1371 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.21□□□□□ -1.9
CCDC112Q8NEF3 AC006378.2-201ENST00000623178 2476 ntBASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 U3.26-201ENST00000391236 204 ntBASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 DNAJC19P6-201ENST00000401853 280 ntBASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 AL353692.2-201ENST00000407054 335 ntBASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 SNORA11C-201ENST00000408532 129 ntBASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 RNU2-21P-201ENST00000410368 188 ntBASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 EI24P1-201ENST00000416584 867 ntBASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 AC244098.2-201ENST00000422068 99 ntBASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 MTCO1P45-201ENST00000431457 267 ntBASIC3.2□□□□□ -1.9
CCDC112Q8NEF3 AC011242.1-201ENST00000433596 1158 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms