Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AC023632.1-201ENST00000518463 375 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 IGJP1-201ENST00000522682 475 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 AC007115.1-201ENST00000546853 234 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 AC125494.3-201ENST00000602759 455 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 AC008638.3-201ENST00000603341 463 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 VN1R74P-201ENST00000613259 503 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 AC011939.3-201ENST00000613686 466 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 AC023158.2-201ENST00000614876 543 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 AC024595.1-201ENST00000623088 387 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 CR392039.4-201ENST00000624968 501 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 EXOC5P1-201ENST00000510543 1969 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 SEC63P2-201ENST00000503863 1939 ntBASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF248Q8NDW4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 NSRP1P1-201ENST00000444067 1693 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 ELL2P3-201ENST00000457883 1602 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 SNORD6-201ENST00000365444 73 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 U8.11-201ENST00000384699 133 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 U8.12-201ENST00000384701 133 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AL138880.1-201ENST00000405824 642 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 RNA5SP80-201ENST00000410475 111 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AL031779.1-201ENST00000415663 330 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AL139247.1-201ENST00000422768 325 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 TBCAP1-201ENST00000436520 327 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 MTCO2P16-201ENST00000436962 677 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 CYCSP43-201ENST00000438233 310 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AC007327.1-201ENST00000447461 264 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 MTND2P19-201ENST00000449129 1012 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 U8.18-201ENST00000459285 133 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 SNORA59A-201ENST00000459326 152 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AC006517.1-201ENST00000480485 328 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AC012170.1-201ENST00000495139 359 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AC025445.1-201ENST00000502728 300 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 OR5H4P-201ENST00000510851 923 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AC092851.1-201ENST00000535964 478 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 HIGD1AP17-201ENST00000554576 276 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 MRPS35P3-201ENST00000603189 709 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AC004987.4-201ENST00000603383 338 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AL139395.1-201ENST00000603662 160 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AP000811.1-201ENST00000603803 651 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 DPRXP5-201ENST00000604662 539 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AC010738.1-201ENST00000604970 987 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AC012531.5-201ENST00000611375 151 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AL354976.1-201ENST00000613843 387 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AL442067.2-201ENST00000614033 363 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 ZNF663P-202ENST00000641770 1131 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 AL353743.4-201ENST00000422653 1547 ntBASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ZNF248Q8NDW4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.81
ZNF248Q8NDW4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.78□□□□□ -1.81
ZNF248Q8NDW4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ZNF248Q8NDW4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms