Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
ARHGEF39Q8N4T4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ARHGEF39Q8N4T4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
ARHGEF39Q8N4T4 C4BPAP1-201ENST00000415474 1893 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC107027.3-201ENST00000565095 3473 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 SNORA17.1-201ENST00000362945 126 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 U8.4-201ENST00000363626 134 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 Y_RNA.231-201ENST00000364358 102 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 RNU1-43P-201ENST00000365052 165 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AL356967.1-201ENST00000406305 431 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 RNU4-26P-201ENST00000410270 107 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 Y_RNA.615-201ENST00000410769 117 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 HNRNPA3P4-201ENST00000427514 803 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 SAR1AP4-201ENST00000429225 591 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 PSMA2P3-201ENST00000429685 675 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC092162.1-201ENST00000432828 434 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 HMGB3P9-201ENST00000441799 583 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 RPS29P15-201ENST00000458329 171 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 SNRPCP2-201ENST00000504370 475 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC017037.2-201ENST00000513850 890 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 RNU4-49P-201ENST00000516080 140 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AL133153.1-201ENST00000557756 303 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 NCAPGP2-201ENST00000557911 754 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 MIR4496-201ENST00000635896 61 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 AC092747.4-201ENST00000620519 1861 ntBASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
ARHGEF39Q8N4T4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 Y_RNA.384-201ENST00000383909 102 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 Y_RNA.419-201ENST00000384041 102 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 RNU6-339P-201ENST00000384310 107 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 RNU6-516P-201ENST00000411381 104 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 AL590609.2-201ENST00000421430 368 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 RPL7AP49-201ENST00000429522 581 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 AL591438.1-201ENST00000433508 581 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 RPS17P13-201ENST00000448974 407 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 CBX1P2-201ENST00000453841 458 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 RPL7L1P8-201ENST00000469911 741 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 RPL21P99-201ENST00000480369 423 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 RN7SL814P-201ENST00000487715 300 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 RNU6-277P-201ENST00000516272 106 ntBASIC4.99□□□□□ -1.61
ARHGEF39Q8N4T4 RN7SKP219-201ENST00000516825 296 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms