Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AC009852.2-201ENST00000567898 485 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 OR4K8P-201ENST00000578842 1048 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 COX6CP3-201ENST00000580869 223 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AL158211.4-201ENST00000606988 584 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AC010424.2-201ENST00000607594 443 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AC007038.2-201ENST00000608095 740 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 TUG1_1.1-201ENST00000610654 145 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AC006338.1-201ENST00000618453 749 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AL356585.4-201ENST00000623078 1229 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 Z73965.1-201ENST00000623412 2297 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 MTND5P3-201ENST00000438536 1800 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 DHX40P1-201ENST00000588725 1412 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 OR4G2P-201ENST00000328113 903 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 Y_RNA.372-201ENST00000365599 102 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC133104.1-201ENST00000429100 218 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC002486.1-201ENST00000435098 391 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 BX842559.2-201ENST00000451418 605 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC021660.1-201ENST00000465006 554 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC004924.1-201ENST00000480160 781 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC020893.1-201ENST00000502452 580 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC009643.1-201ENST00000532030 391 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AL133241.1-201ENST00000556832 487 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC090517.2-201ENST00000614966 680 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 MIR6839-201ENST00000620425 113 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC093536.2-201ENST00000565257 1406 ntBASIC5.06□□□□□ -1.6
SYNPOQ8N3V7 AC022893.2-201ENST00000564832 3296 ntBASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 RNA5SP191-201ENST00000362585 102 ntBASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 RNY3P13-201ENST00000365542 102 ntBASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 RNA5SP332-201ENST00000391063 115 ntBASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 SNORD115-47-201ENST00000391226 86 ntBASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 MTCO3P40-201ENST00000392516 676 ntBASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 SNORA77-201ENST00000408716 125 ntBASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 RNU6-712P-201ENST00000410558 100 ntBASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 AC114755.2-201ENST00000413520 361 ntBASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 AL137014.1-201ENST00000420490 1226 ntBASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 MRPS10P2-201ENST00000431226 381 ntBASIC5.05□□□□□ -1.6
SYNPOQ8N3V7 BX323845.1-201ENST00000432417 179 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms