Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 VN1R9P-201ENST00000614184 867 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 MIR6075-201ENST00000620782 95 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AC091948.2-201ENST00000636510 279 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 MTND5P7-201ENST00000413558 1798 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC004925.1-201ENST00000624256 2706 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC103988.1-201ENST00000566382 2177 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AL357075.1-201ENST00000404107 726 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 PTGES3P2-201ENST00000407942 482 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 RN7SKP27-201ENST00000410684 333 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 UBE2V1P11-201ENST00000411559 285 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 GTF2IP23-201ENST00000423746 351 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 MTATP6P11-201ENST00000428071 670 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 RPL21P40-201ENST00000428586 483 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 YME1L1P1-201ENST00000429435 297 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 snoU13.7-201ENST00000459220 104 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 ST13P14-201ENST00000474095 734 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 MTND3P24-201ENST00000506306 329 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC008885.2-201ENST00000509506 930 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AP001207.2-201ENST00000519490 539 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 OSBPL9P3-201ENST00000534523 595 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AL442163.2-201ENST00000553912 710 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 MAGOH2P-202ENST00000584384 429 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC012314.7-201ENST00000619693 93 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 AC097372.4-201ENST00000625025 466 ntBASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CCDC65Q8IXS2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 OR1S2-201ENST00000302592 978 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 RNU6-481P-201ENST00000384194 107 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 U3.19-201ENST00000390893 196 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 NDUFB4P5-201ENST00000415445 361 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AC093422.3-201ENST00000428506 305 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AC009969.1-201ENST00000438726 172 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 UBE2V1P5-201ENST00000440070 405 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 MTND1P33-201ENST00000446251 917 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 NF1P3-201ENST00000457709 450 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AC091153.1-201ENST00000466297 402 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AC015724.1-201ENST00000478577 156 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 OR5H3P-201ENST00000502817 919 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AC005351.1-201ENST00000511152 786 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AC093755.1-201ENST00000512950 1023 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 RNA5SP385-201ENST00000515947 110 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 ATP5F1P7-201ENST00000567330 760 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 MIR4506-201ENST00000584693 77 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AC021851.1-201ENST00000608537 1082 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AL512506.1-201ENST00000613918 449 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AC020923.1-201ENST00000624021 917 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 AL356094.1-201ENST00000624663 1212 ntBASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC65Q8IXS2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 ELL2P4-201ENST00000446870 1376 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 XPOTP1-201ENST00000443317 2398 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 RNU6-1339P-201ENST00000363574 91 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 RNA5SP72-201ENST00000364442 117 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 ATP5F1P6-201ENST00000402768 767 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 RPS3AP25-201ENST00000411660 793 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 HMGB3P23-201ENST00000414981 585 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AL606495.1-201ENST00000422100 813 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AL121882.1-201ENST00000422893 417 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC005300.1-201ENST00000428401 373 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC005326.1-201ENST00000429197 123 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 RPL17P35-201ENST00000432217 549 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 YWHAZP8-201ENST00000436935 731 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms