Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC024257.5-201ENST00000612739 531 ntBASIC3.47□□□□□ -1.85
CCDC71Q8IV32 AC008121.2-201ENST00000614647 523 ntBASIC3.47□□□□□ -1.85
CCDC71Q8IV32 AC084757.4-201ENST00000616350 526 ntBASIC3.47□□□□□ -1.85
CCDC71Q8IV32 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC71Q8IV32 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC71Q8IV32 FAM157B-203ENST00000639350 358 ntBASIC3.47□□□□□ -1.85
CCDC71Q8IV32 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC71Q8IV32 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 RNU6-251P-201ENST00000363235 104 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 RNU6-1066P-201ENST00000363573 105 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 MIR184-201ENST00000384962 84 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 RNU6-1300P-201ENST00000391046 108 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 RPL21P17-201ENST00000397467 475 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 EI24P2-201ENST00000397776 1076 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AL592310.1-201ENST00000414330 671 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 RPL36P19-201ENST00000430744 301 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC241584.1-201ENST00000438469 1241 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 PRSS3P4-201ENST00000453323 162 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 PNPLA4P1-201ENST00000458328 305 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 SNORD11.1-201ENST00000459482 85 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 RPL21P11-201ENST00000461458 483 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 SNRPGP3-201ENST00000469405 227 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC084024.2-201ENST00000503480 791 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 HMGN1P11-201ENST00000508668 303 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC022695.1-201ENST00000522089 237 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 HIGD1AP10-201ENST00000527837 282 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 MTND1P24-201ENST00000552175 861 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 MIR3186-201ENST00000577404 85 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC007687.1-201ENST00000602704 304 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AL450336.1-201ENST00000605180 586 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC019176.2-201ENST00000611579 315 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 RNVU1-4-201ENST00000612985 164 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC026634.1-201ENST00000634369 198 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AF001550.2-201ENST00000636643 217 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 AC090897.3-201ENST00000636973 1157 ntBASIC3.46□□□□□ -1.86
CCDC71Q8IV32 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CCDC71Q8IV32 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC71Q8IV32 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC71Q8IV32 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC71Q8IV32 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC71Q8IV32 ZNF33CP-201ENST00000432492 2030 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC71Q8IV32 AP000568.1-201ENST00000282964 442 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 RNU4-92P-201ENST00000363783 136 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 RNU6-1243P-201ENST00000364028 107 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 RNU6-441P-201ENST00000384545 106 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 BTBD10P2-201ENST00000404779 676 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CCDC71Q8IV32 FCF1P2-201ENST00000415284 583 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 AC007390.1-201ENST00000415722 356 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 RPS3AP9-201ENST00000417027 792 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC71Q8IV32 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC71Q8IV32 HMGN2P31-201ENST00000432430 273 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 SEPT7P5-201ENST00000434048 306 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 RPL23AP83-201ENST00000434984 473 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC71Q8IV32 AC093155.1-201ENST00000440164 826 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 AC007327.1-201ENST00000447461 264 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 NDUFA5P7-201ENST00000452914 242 ntBASIC3.45□□□□□ -1.86
CCDC71Q8IV32 AC005410.1-202ENST00000460347 485 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms