Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC010266.2-201ENST00000564741 3255 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 AC092070.2-203ENST00000598377 3644 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 NACAP2-201ENST00000318548 624 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 RNU6-845P-201ENST00000362578 103 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 SNORD81.2-201ENST00000365153 76 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 Y_RNA.381-201ENST00000365666 102 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 RNU6-767P-201ENST00000384132 107 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 RNU6-74P-201ENST00000384235 107 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 RNU6-754P-201ENST00000391166 107 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 RNU4-78P-201ENST00000410940 126 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 PDCL2P1-201ENST00000419302 352 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 MRPS18BP2-201ENST00000434310 759 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 SNORD97-201ENST00000459187 142 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 AC021660.1-201ENST00000465006 554 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 AC083982.1-201ENST00000485679 344 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 AC105417.1-201ENST00000514691 285 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 PSMA3P-201ENST00000555485 635 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 MIR3934-201ENST00000579806 107 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 RN7SL356P-201ENST00000582228 248 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 MIR4480-201ENST00000582492 71 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 AC011712.1-201ENST00000588959 234 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 AC009597.2-201ENST00000604659 592 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 AC068769.1-201ENST00000474767 2426 ntBASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPAS4Q8IUM7 AC002525.1-201ENST00000624392 1622 ntBASIC5.77□□□□□ -1.48
NPAS4Q8IUM7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AC073343.1-201ENST00000328239 651 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 Y_RNA.138-201ENST00000363462 102 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 RNU6-263P-201ENST00000363811 107 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 Y_RNA.255-201ENST00000364581 97 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 RNU6-996P-201ENST00000365438 107 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 Y_RNA.367-201ENST00000365544 101 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 Z97832.1-201ENST00000402490 328 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 KRT8P51-201ENST00000438938 274 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AC016696.1-201ENST00000446949 318 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AC104634.1-201ENST00000452720 462 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AC005008.1-201ENST00000456151 612 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 RPS20P20-201ENST00000460498 340 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 RPS3AP41-201ENST00000462701 778 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 PCBP2P3-201ENST00000509726 843 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 SNORD27.1-201ENST00000516319 72 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 HIGD1AP5-201ENST00000529959 259 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AC060780.2-201ENST00000589047 198 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 BNIP3P22-201ENST00000593399 556 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AP000769.2-201ENST00000602344 396 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AC103710.2-201ENST00000609912 942 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AC091953.3-201ENST00000623220 236 ntBASIC5.77□□□□□ -1.49
NPAS4Q8IUM7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms