Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 FTH1P1-201ENST00000437933 532 ntBASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 AC008571.1-201ENST00000467232 300 ntBASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 SNORD116.3-201ENST00000517176 78 ntBASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 OR4P1P-201ENST00000530808 1136 ntBASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 COX6CP3-201ENST00000580869 223 ntBASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 MIR6128-201ENST00000615528 109 ntBASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 AC011155.2-201ENST00000623202 216 ntBASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 AL022323.4-201ENST00000623980 13120 ntBASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 SRRM1P3-201ENST00000426911 2678 ntBASIC6.53□□□□□ -1.36
SH3RF1Q7Z6J0 MTND5P28-201ENST00000438005 1594 ntBASIC6.52□□□□□ -1.36
SH3RF1Q7Z6J0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 OR55B1P-203ENST00000641518 2602 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 AC007842.1-201ENST00000597336 2039 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 RNU6-874P-201ENST00000362390 105 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 RNU6-1287P-201ENST00000362914 107 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 Y_RNA.288-201ENST00000364854 92 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 RNU6-729P-201ENST00000384399 107 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 RNU6-1060P-201ENST00000384664 107 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 Y_RNA.645-201ENST00000391229 102 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 RN7SKP125-201ENST00000410481 302 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 RPL12P20-201ENST00000475538 479 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 ATP5LP5-201ENST00000483050 299 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 RNU6-189P-201ENST00000516120 101 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 RNU6-699P-201ENST00000517081 110 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 CDH12P4-201ENST00000517835 295 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 CDH12P3-201ENST00000517935 295 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 CDH12P1-201ENST00000518435 295 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 AL512329.2-201ENST00000607350 548 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 AL732372.2-225ENST00000642124 456 ntBASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SH3RF1Q7Z6J0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AC011933.2-201ENST00000578539 2790 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 Y_RNA.117-201ENST00000363294 101 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 RNU1-115P-201ENST00000365329 160 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 RNU2-22P-201ENST00000411266 212 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 HMGN1P24-201ENST00000412282 298 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 RPL6P29-201ENST00000414863 865 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 RPL23AP27-201ENST00000415161 451 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AL162388.1-201ENST00000450912 352 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AC002553.2-201ENST00000453217 340 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 CBX1P2-201ENST00000453841 458 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 RPS17P15-201ENST00000475609 349 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AC022215.1-201ENST00000481770 362 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AC068305.1-201ENST00000497406 726 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AC105384.2-201ENST00000508433 640 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AC116337.1-201ENST00000509680 687 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AC018797.3-201ENST00000513388 1241 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 RNU6-470P-201ENST00000515954 104 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AC024224.1-201ENST00000538284 609 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms