Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC068722.2-201ENST00000618734 544 ntBASIC4.54□□□□□ -1.68
SYNE3Q6ZMZ3 AC068831.8-201ENST00000620171 435 ntBASIC4.54□□□□□ -1.68
SYNE3Q6ZMZ3 AC004943.3-201ENST00000624116 600 ntBASIC4.54□□□□□ -1.68
SYNE3Q6ZMZ3 AC068724.3-201ENST00000625906 87 ntBASIC4.54□□□□□ -1.68
SYNE3Q6ZMZ3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.54□□□□□ -1.68
SYNE3Q6ZMZ3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SYNE3Q6ZMZ3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.54□□□□□ -1.68
SYNE3Q6ZMZ3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SYNE3Q6ZMZ3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SYNE3Q6ZMZ3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.54□□□□□ -1.68
SYNE3Q6ZMZ3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SYNE3Q6ZMZ3 AC090229.1-201ENST00000590983 1609 ntBASIC4.54□□□□□ -1.68
SYNE3Q6ZMZ3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC012321.1-201ENST00000561622 1588 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AL122126.1-201ENST00000546905 1318 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 SNRPEP3-201ENST00000338402 276 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 RNU4-40P-201ENST00000364351 143 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 RNU6-213P-201ENST00000384051 104 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AL590084.2-201ENST00000401481 382 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 ZNF603P-201ENST00000405613 487 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 RN7SKP56-201ENST00000410513 331 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 RN7SKP263-201ENST00000411194 309 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AL354941.1-201ENST00000438600 464 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AL445567.1-201ENST00000439121 144 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 RPL23AP16-201ENST00000441715 421 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 USP9YP10-201ENST00000454868 628 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 OR9M1P-201ENST00000459641 921 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 USP9YP5-201ENST00000511770 630 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC118465.1-201ENST00000513820 1271 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC016065.2-201ENST00000514530 444 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC104057.1-201ENST00000515547 497 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC022790.1-201ENST00000522872 204 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC090888.1-201ENST00000561335 1141 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC067852.4-201ENST00000590314 478 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 VIS1.1-201ENST00000610517 203 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AL713922.2-201ENST00000619384 716 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AP000676.3-201ENST00000623299 569 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC073530.2-201ENST00000623987 261 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 AC009039.2-201ENST00000624524 529 ntBASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNE3Q6ZMZ3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
SYNE3Q6ZMZ3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
SYNE3Q6ZMZ3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.53□□□□□ -1.69
SYNE3Q6ZMZ3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.53□□□□□ -1.69
SYNE3Q6ZMZ3 ELL2P4-201ENST00000446870 1376 ntBASIC4.53□□□□□ -1.69
SYNE3Q6ZMZ3 ZNF37BP-203ENST00000452306 1352 ntBASIC4.53□□□□□ -1.69
SYNE3Q6ZMZ3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 RPL23AP29-201ENST00000397284 453 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 MIR1284-201ENST00000408337 120 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 SNORA3.3-201ENST00000408712 125 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 USP9YP26-201ENST00000421008 661 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC011233.1-201ENST00000422812 283 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 OR4F13P-201ENST00000428478 931 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AL390023.1-201ENST00000428836 262 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AL500522.2-201ENST00000448562 343 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 RPL26P28-201ENST00000451325 435 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 LINC00888-204ENST00000487386 421 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC093267.1-201ENST00000489176 961 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 AC068305.1-201ENST00000497406 726 ntBASIC4.52□□□□□ -1.69
SYNE3Q6ZMZ3 SETP14-201ENST00000497538 873 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms