Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC016716.1-201ENST00000265882 708 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 RNU6-1066P-201ENST00000363573 105 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 RNU6-501P-201ENST00000364072 100 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 RNU6-1042P-201ENST00000384204 107 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 RNU6-297P-201ENST00000384636 107 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AL139098.1-201ENST00000407291 389 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 RNU6-248P-201ENST00000410720 107 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 RNA5SP306-201ENST00000411087 107 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 JKAMPP1-201ENST00000413804 919 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 BOLA3P4-201ENST00000418151 400 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AL358472.1-201ENST00000431295 329 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 PPIAP17-201ENST00000438507 471 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 RPL23AP46-201ENST00000438548 490 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 ELOCP10-201ENST00000440624 327 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 RPS7P5-201ENST00000441482 581 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AL022238.1-201ENST00000442557 355 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 VN1R34P-201ENST00000447387 883 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 RPL7P59-201ENST00000447700 943 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 RPL7L1P1-201ENST00000448259 785 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC243772.1-201ENST00000451620 410 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 RPL10P17-201ENST00000453852 316 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 CEACAMP10-202ENST00000495431 496 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC011352.3-201ENST00000505162 593 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 LARP1BP1-201ENST00000506036 1359 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 IGBP1P5-201ENST00000507524 1000 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 RNU7-143P-201ENST00000516781 65 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC136618.2-201ENST00000575091 400 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 ELOCP34-201ENST00000604436 327 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC069304.2-201ENST00000605154 435 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC107214.2-201ENST00000608204 634 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC018926.3-201ENST00000618841 406 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AP005264.7-201ENST00000625003 745 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 MIR3653-201ENST00000625572 110 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 OR5H6-203ENST00000642105 978 ntBASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZNF549Q6P9A3 AC116667.1-201ENST00000604855 2072 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 RN7SKP226-201ENST00000364912 300 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 Y_RNA.582-201ENST00000391023 95 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 HSPD1P16-201ENST00000402302 394 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AL450338.1-201ENST00000407987 512 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 RN7SKP56-201ENST00000410513 331 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 RNU2-6P-201ENST00000411404 190 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 Z97055.1-201ENST00000419730 712 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 RPL21P32-201ENST00000419877 477 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC092647.1-201ENST00000420654 287 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 USP9YP18-201ENST00000425912 695 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 ISCA1P1-201ENST00000426679 387 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AL513175.1-201ENST00000431492 780 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 B3GNT2P1-201ENST00000434960 952 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 YWHAQP9-201ENST00000445891 512 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AL451050.1-201ENST00000450126 415 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC009220.1-201ENST00000451614 275 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 RPL18AP17-201ENST00000455326 198 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 RPL36AP13-201ENST00000457490 317 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 MTND6P6-201ENST00000478031 263 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 TMED11P-201ENST00000479478 690 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AL161747.1-201ENST00000480068 358 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 RN7SL809P-201ENST00000482040 297 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC139783.2-201ENST00000504847 1145 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC093840.1-201ENST00000511599 336 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 RNU6-718P-201ENST00000516166 105 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 RNU6-1261P-201ENST00000517194 104 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 IGKV2-38-201ENST00000517443 247 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC009643.1-201ENST00000532030 391 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC118273.2-201ENST00000532092 465 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms