Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 HMGN1P24-201ENST00000412282 298 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 RAD23BP2-201ENST00000416003 1207 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AC096632.1-201ENST00000427395 310 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 BX248409.1-201ENST00000455497 255 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 RPS27P29-201ENST00000463110 252 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AC010401.1-201ENST00000463867 348 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 RPS27P23-201ENST00000487608 251 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 DSTNP2-201ENST00000504533 515 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 SNORA70.19-201ENST00000516717 90 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AC026616.1-201ENST00000523157 525 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 OR5AP1P-201ENST00000529730 940 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 MIR3200-201ENST00000580767 85 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AC022069.1-201ENST00000582910 658 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 MIR4276-201ENST00000584832 70 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 BNIP3P38-201ENST00000601117 544 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AC079880.2-201ENST00000603790 1213 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AL513477.2-201ENST00000607858 568 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AL390240.1-201ENST00000612950 384 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 MIR7112-201ENST00000616126 65 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AC092326.2-201ENST00000624772 1561 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.12□□□□□ -1.91
H3F3CQ6NXT2 AC073055.1-201ENST00000456901 1621 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 MIR483-201ENST00000385070 76 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AL136116.1-201ENST00000403591 381 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 RNU6-55P-201ENST00000411092 107 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 RNU6-954P-201ENST00000411355 107 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 MTCO3P12-201ENST00000416718 547 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 PAICSP7-201ENST00000419829 962 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 MTCO3P43-201ENST00000440974 771 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 RPL17P49-201ENST00000443728 411 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 RN7SL442P-201ENST00000473804 320 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 OR52A4P-202ENST00000481634 799 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC110794.1-201ENST00000505816 425 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 SNORA74D-201ENST00000516404 141 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 RN7SKP57-201ENST00000517248 293 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC019227.1-201ENST00000526902 510 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 OR4A45P-201ENST00000529954 901 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 UBE2NP1-201ENST00000545592 458 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 DPRXP5-201ENST00000604662 539 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC016877.3-201ENST00000606778 504 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC012467.1-201ENST00000607740 256 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AL354976.1-201ENST00000613843 387 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AL356321.1-201ENST00000621360 228 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 SNORA50A-202ENST00000629536 136 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC073073.2-201ENST00000609827 2578 ntBASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
H3F3CQ6NXT2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AC058791.1-201ENST00000608412 3198 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms