Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL359511.1-201ENST00000402970 211 ntBASIC2.42□□□□□ -2.02
RIF1Q5UIP0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.42□□□□□ -2.02
RIF1Q5UIP0 AC026436.1-201ENST00000510537 270 ntBASIC2.42□□□□□ -2.02
RIF1Q5UIP0 RNA5SP480-201ENST00000516840 109 ntBASIC2.42□□□□□ -2.02
RIF1Q5UIP0 SETP1-201ENST00000556014 845 ntBASIC2.42□□□□□ -2.02
RIF1Q5UIP0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.42□□□□□ -2.02
RIF1Q5UIP0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.42□□□□□ -2.02
RIF1Q5UIP0 SNORD114-26-201ENST00000363543 72 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RIF1Q5UIP0 RNA5SP104-201ENST00000410989 118 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 AC006960.1-201ENST00000419980 153 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 BX679664.1-201ENST00000434429 253 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 RPS26P30-201ENST00000443431 335 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.41□□□□□ -2.02
RIF1Q5UIP0 MIR449C-201ENST00000516047 92 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 HSPE1P18-201ENST00000517602 280 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 AP000790.1-201ENST00000528891 737 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.41□□□□□ -2.02
RIF1Q5UIP0 AL359821.1-201ENST00000605519 182 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 AL136964.1-201ENST00000622038 2990 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 CUL1P1-201ENST00000509510 2425 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RIF1Q5UIP0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RIF1Q5UIP0 RNA5SP274-201ENST00000410484 108 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 AP000893.1-201ENST00000474462 794 ntBASIC2.41□□□□□ -2.02
RIF1Q5UIP0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.41□□□□□ -2.02
RIF1Q5UIP0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.41□□□□□ -2.02
RIF1Q5UIP0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.4□□□□□ -2.02
RIF1Q5UIP0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
RIF1Q5UIP0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 U3.6-201ENST00000363622 211 ntBASIC2.4□□□□□ -2.03
RIF1Q5UIP0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 RN7SL633P-201ENST00000488974 297 ntBASIC2.4□□□□□ -2.03
RIF1Q5UIP0 RNU6-295P-201ENST00000516901 104 ntBASIC2.4□□□□□ -2.03
RIF1Q5UIP0 MYL12AP1-201ENST00000518490 515 ntBASIC2.4□□□□□ -2.03
RIF1Q5UIP0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 MAPK10-362ENST00000641864 4484 ntBASIC2.4□□□□□ -2.03
RIF1Q5UIP0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 AC073587.1-201ENST00000447093 876 ntBASIC2.4□□□□□ -2.03
RIF1Q5UIP0 AP000942.1-201ENST00000463969 747 ntBASIC2.4□□□□□ -2.03
RIF1Q5UIP0 FABP5P12-201ENST00000515543 389 ntBASIC2.4□□□□□ -2.03
RIF1Q5UIP0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.4□□□□□ -2.03
RIF1Q5UIP0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RIF1Q5UIP0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.39□□□□□ -2.03
RIF1Q5UIP0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
RIF1Q5UIP0 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RIF1Q5UIP0 RNU1-89P-201ENST00000384592 164 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 MIR613-201ENST00000385248 95 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC2.39□□□□□ -2.03
RIF1Q5UIP0 USP9YP6-201ENST00000413550 854 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 OR2AS1P-201ENST00000427827 319 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 USP9YP34-201ENST00000453983 808 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 CYCSP20-201ENST00000473154 315 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 AC087385.1-201ENST00000475062 312 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.39□□□□□ -2.03
RIF1Q5UIP0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.39□□□□□ -2.03
RIF1Q5UIP0 AK6P1-201ENST00000540219 478 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 HMGB1P50-201ENST00000605814 607 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 snoU13.31-201ENST00000607291 104 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 CR381653.2-201ENST00000624041 768 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 Z73965.1-201ENST00000623412 2297 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.39□□□□□ -2.03
RIF1Q5UIP0 FGF7P8-201ENST00000402994 292 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 AC245054.2-201ENST00000415639 319 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.39□□□□□ -2.03
RIF1Q5UIP0 ISCA1P2-201ENST00000438679 421 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.39□□□□□ -2.03
RIF1Q5UIP0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.39□□□□□ -2.03
RIF1Q5UIP0 AC100870.1-201ENST00000522035 505 ntBASIC2.39□□□□□ -2.03
RIF1Q5UIP0 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.39□□□□□ -2.03
RIF1Q5UIP0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RIF1Q5UIP0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
RIF1Q5UIP0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RIF1Q5UIP0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
RIF1Q5UIP0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.38□□□□□ -2.03
RIF1Q5UIP0 RPS29P6-201ENST00000438196 145 ntBASIC2.38□□□□□ -2.03
RIF1Q5UIP0 RPL23AP49-201ENST00000492925 468 ntBASIC2.38□□□□□ -2.03
RIF1Q5UIP0 AL024509.2-201ENST00000493462 493 ntBASIC2.38□□□□□ -2.03
RIF1Q5UIP0 AP005136.1-201ENST00000579765 429 ntBASIC2.38□□□□□ -2.03
RIF1Q5UIP0 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.38□□□□□ -2.03
RIF1Q5UIP0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.38□□□□□ -2.03
RIF1Q5UIP0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.38□□□□□ -2.03
RIF1Q5UIP0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.38□□□□□ -2.03
RIF1Q5UIP0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.38□□□□□ -2.03
RIF1Q5UIP0 RNU6-661P-201ENST00000362409 107 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 EIF5P1-201ENST00000400019 1231 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 AL590084.1-201ENST00000407885 387 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 DNAJC19P4-201ENST00000440115 345 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 AC104389.3-201ENST00000445629 235 ntBASIC2.37□□□□□ -2.03
RIF1Q5UIP0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms