Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC38Q502W7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC38Q502W7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC38Q502W7 AC008033.1-201ENST00000216407 1162 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC38Q502W7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC38Q502W7 RNA5SP388-201ENST00000362584 119 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 RNU6-777P-201ENST00000364265 104 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 RNA5SP505-201ENST00000364748 108 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC38Q502W7 SNORA56-201ENST00000383966 129 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 RNU1-89P-201ENST00000384592 164 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 RN7SKP266-201ENST00000410232 287 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AC016397.1-201ENST00000412463 242 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 EI24P1-201ENST00000416584 867 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AL139095.3-201ENST00000419672 1203 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 RBMY1KP-201ENST00000423480 476 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 FTH1P6-201ENST00000430768 320 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 MTCYBP45-201ENST00000435243 565 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 AC025554.1-201ENST00000505641 188 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 TXNP6-201ENST00000510190 310 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AC010486.3-201ENST00000511602 785 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 AC093677.1-201ENST00000514414 678 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 OR5AP1P-201ENST00000529730 940 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AC068587.4-201ENST00000533893 186 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 SETP7-201ENST00000552169 453 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AL352979.3-201ENST00000553515 247 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC38Q502W7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 AC010928.3-201ENST00000587712 541 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 SNRPGP15-201ENST00000600149 222 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AC128687.1-201ENST00000605304 619 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 MIR432-201ENST00000606207 94 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AL392048.1-201ENST00000613946 534 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 AF246928.1-201ENST00000623768 87 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 RAD17P1-201ENST00000418130 2042 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC38Q502W7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC38Q502W7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC38Q502W7 AL049780.3-201ENST00000624612 1583 ntBASIC4.44□□□□□ -1.7
CCDC38Q502W7 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC38Q502W7 AL445523.1-201ENST00000451184 1362 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC38Q502W7 MFSD8-242ENST00000641690 4199 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 OR4K15-201ENST00000305051 1216 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 AL161781.1-201ENST00000354277 403 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 RNU6-335P-201ENST00000364563 113 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 MIR192-201ENST00000384915 110 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC38Q502W7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 AL807761.1-201ENST00000417622 171 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 AL162591.2-201ENST00000449634 317 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 AL353691.1-201ENST00000451332 387 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 HMGB3P22-202ENST00000451823 572 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 AC097262.1-201ENST00000452559 548 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 NDUFA12P1-201ENST00000455914 406 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 RPS20P32-201ENST00000456044 356 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 ST13P14-201ENST00000474095 734 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 AC017015.1-201ENST00000477387 286 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 AC093267.1-201ENST00000489176 961 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 RN7SL812P-201ENST00000493791 279 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC38Q502W7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 CBX3P5-201ENST00000552017 521 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 PSMB7P1-201ENST00000556349 514 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 AC084783.1-201ENST00000565846 910 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 Z99497.2-201ENST00000603634 310 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms