Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 HNRNPDP2-201ENST00000406475 478 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 MRPL50P2-201ENST00000416821 482 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 FAR1P1-201ENST00000427163 934 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 TRIM60P13-201ENST00000432350 1283 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 RPL23AP22-201ENST00000437556 453 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.09□□□□□ -1.75
PTCH1Q13635 AL513328.1-201ENST00000446460 224 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 AC092685.1-201ENST00000447960 1243 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 SNORD109B-201ENST00000458961 67 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 SNORD109A-201ENST00000459128 67 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 AP002884.2-201ENST00000471647 395 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 RPS17P11-201ENST00000474297 293 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 HSPE1P6-201ENST00000479457 291 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.09□□□□□ -1.75
PTCH1Q13635 HAUS1P3-201ENST00000523909 662 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PTCH1Q13635 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PTCH1Q13635 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PTCH1Q13635 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
PTCH1Q13635 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.09□□□□□ -1.76
PTCH1Q13635 AL592494.2-201ENST00000425455 1548 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.08□□□□□ -1.76
PTCH1Q13635 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.08□□□□□ -1.76
PTCH1Q13635 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.08□□□□□ -1.76
PTCH1Q13635 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCH1Q13635 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCH1Q13635 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCH1Q13635 RPS6P12-201ENST00000432491 726 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 ZNF965P-201ENST00000432501 817 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 AC023347.2-201ENST00000433994 462 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCH1Q13635 AC117522.3-201ENST00000507974 584 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 SNORA31.13-201ENST00000516624 135 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 EEF1A1P37-201ENST00000522748 715 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.08□□□□□ -1.76
PTCH1Q13635 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCH1Q13635 AC007566.2-201ENST00000603642 413 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 AC110741.2-201ENST00000605278 268 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 AC100814.1-201ENST00000606963 623 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 AC078899.5-201ENST00000612475 178 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.08□□□□□ -1.76
PTCH1Q13635 AC007318.2-201ENST00000620999 243 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.08□□□□□ -1.76
PTCH1Q13635 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTCH1Q13635 PNPT1P2-201ENST00000456768 2050 ntBASIC4.08□□□□□ -1.76
PTCH1Q13635 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTCH1Q13635 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCH1Q13635 AL049737.1-201ENST00000413920 1403 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTCH1Q13635 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTCH1Q13635 RPL7P26-201ENST00000333817 754 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 SNORD56.3-201ENST00000363507 71 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 AL356057.1-202ENST00000402263 756 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.07□□□□□ -1.76
PTCH1Q13635 RPL7P29-201ENST00000437151 728 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 XKRY2-201ENST00000442362 1093 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 AC097499.1-201ENST00000444277 208 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCH1Q13635 RPS20P22-201ENST00000473700 357 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.07□□□□□ -1.76
PTCH1Q13635 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.07□□□□□ -1.76
PTCH1Q13635 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.07□□□□□ -1.76
PTCH1Q13635 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PTCH1Q13635 MIR5047-201ENST00000579212 100 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 AC083899.3-201ENST00000603413 594 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 AC018618.2-201ENST00000604770 446 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 KATNBL1P1-201ENST00000605192 748 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 AC004832.5-201ENST00000608677 401 ntBASIC4.07□□□□□ -1.76
PTCH1Q13635 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCH1Q13635 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.07□□□□□ -1.76
PTCH1Q13635 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCH1Q13635 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PTCH1Q13635 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCH1Q13635 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCH1Q13635 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.07□□□□□ -1.76
PTCH1Q13635 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTCH1Q13635 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PTCH1Q13635 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCH1Q13635 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.06□□□□□ -1.76
PTCH1Q13635 SNORA67.4-201ENST00000384688 142 ntBASIC4.06□□□□□ -1.76
PTCH1Q13635 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCH1Q13635 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTCH1Q13635 ELOCP6-201ENST00000429066 328 ntBASIC4.06□□□□□ -1.76
PTCH1Q13635 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.06□□□□□ -1.76
PTCH1Q13635 ELOCP12-201ENST00000458706 328 ntBASIC4.06□□□□□ -1.76
PTCH1Q13635 AP000926.1-201ENST00000479573 241 ntBASIC4.06□□□□□ -1.76
PTCH1Q13635 AC012170.1-201ENST00000495139 359 ntBASIC4.06□□□□□ -1.76
PTCH1Q13635 AC110792.2-201ENST00000510278 224 ntBASIC4.06□□□□□ -1.76
PTCH1Q13635 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCH1Q13635 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.06□□□□□ -1.76
PTCH1Q13635 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTCH1Q13635 AC004923.2-201ENST00000529649 369 ntBASIC4.06□□□□□ -1.76
PTCH1Q13635 PTP4A1P6-201ENST00000531034 478 ntBASIC4.06□□□□□ -1.76
PTCH1Q13635 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.06□□□□□ -1.76
PTCH1Q13635 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.06□□□□□ -1.76
PTCH1Q13635 AC090751.1-201ENST00000566966 267 ntBASIC4.06□□□□□ -1.76
PTCH1Q13635 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCH1Q13635 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.06□□□□□ -1.76
PTCH1Q13635 AL392112.1-201ENST00000605115 829 ntBASIC4.06□□□□□ -1.76
PTCH1Q13635 PLCE1P1-201ENST00000622094 305 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms