Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
HSPG2P98160 RAD1P1-201ENST00000231383 813 ntBASIC1.57□□□□□ -2.16
HSPG2P98160 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
HSPG2P98160 AL583834.1-201ENST00000406943 343 ntBASIC1.57□□□□□ -2.16
HSPG2P98160 MIR1276-201ENST00000408707 83 ntBASIC1.57□□□□□ -2.16
HSPG2P98160 FAM92A1P2-202ENST00000504766 877 ntBASIC1.57□□□□□ -2.16
HSPG2P98160 SNORA64.4-201ENST00000516632 81 ntBASIC1.57□□□□□ -2.16
HSPG2P98160 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC1.57□□□□□ -2.16
HSPG2P98160 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
HSPG2P98160 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HSPG2P98160 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HSPG2P98160 MTCO1P7-201ENST00000419523 1542 ntBASIC1.57□□□□□ -2.16
HSPG2P98160 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC1.57□□□□□ -2.16
HSPG2P98160 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC1.57□□□□□ -2.16
HSPG2P98160 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
HSPG2P98160 GCNT6-201ENST00000379591 934 ntBASIC1.57□□□□□ -2.16
HSPG2P98160 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC1.57□□□□□ -2.16
HSPG2P98160 RN7SKP32-201ENST00000410167 303 ntBASIC1.57□□□□□ -2.16
HSPG2P98160 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.57□□□□□ -2.16
HSPG2P98160 NRBF2P1-201ENST00000587407 859 ntBASIC1.57□□□□□ -2.16
HSPG2P98160 AC022960.2-201ENST00000616300 666 ntBASIC1.57□□□□□ -2.16
HSPG2P98160 GABPAP-201ENST00000419271 1356 ntBASIC1.57□□□□□ -2.16
HSPG2P98160 AL512646.1-201ENST00000269395 1077 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC1.56□□□□□ -2.16
HSPG2P98160 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
HSPG2P98160 SNORA46-201ENST00000384762 135 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 AC127526.1-201ENST00000417526 366 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 NANOGP5-201ENST00000424456 877 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC1.56□□□□□ -2.16
HSPG2P98160 AC133473.1-201ENST00000455173 299 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HSPG2P98160 ST13P14-201ENST00000474095 734 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 KCTD9P5-201ENST00000504141 1170 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 NARSP2-201ENST00000518524 679 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 AC011611.5-201ENST00000552477 578 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 RPP40P2-201ENST00000603596 712 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 AC068313.1-201ENST00000604028 1008 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HSPG2P98160 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HSPG2P98160 RNU6-321P-201ENST00000410912 106 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.56□□□□□ -2.16
HSPG2P98160 VWA8P1-201ENST00000510889 176 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 AK6P1-201ENST00000540219 478 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 ZNF861P-201ENST00000588126 639 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 AC104237.2-201ENST00000612456 443 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 AL359715.4-201ENST00000606629 1436 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.56□□□□□ -2.16
HSPG2P98160 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HSPG2P98160 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HSPG2P98160 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
HSPG2P98160 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HSPG2P98160 AC109315.1-201ENST00000584143 1347 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 AC016687.1-201ENST00000482574 353 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 RNA5SP480-201ENST00000516840 109 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.56□□□□□ -2.16
HSPG2P98160 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.56□□□□□ -2.16
HSPG2P98160 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.56□□□□□ -2.16
HSPG2P98160 snoU13.31-201ENST00000607291 104 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 MIR6779-201ENST00000617283 64 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC1.56□□□□□ -2.16
HSPG2P98160 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC1.56□□□□□ -2.16
HSPG2P98160 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.56□□□□□ -2.16
HSPG2P98160 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.56□□□□□ -2.16
HSPG2P98160 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
HSPG2P98160 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HSPG2P98160 RNU1-73P-201ENST00000383971 164 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 SNORA26.9-201ENST00000391322 122 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 ZNF603P-201ENST00000405613 487 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 RPL31P12-201ENST00000422587 358 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 AC108667.1-201ENST00000428618 249 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 RPS26P30-201ENST00000443431 335 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 RPL21P41-201ENST00000459863 264 ntBASIC1.56□□□□□ -2.16
HSPG2P98160 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.56□□□□□ -2.16
HSPG2P98160 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HSPG2P98160 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HSPG2P98160 AC004925.1-201ENST00000624256 2706 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HSPG2P98160 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HSPG2P98160 Y_RNA.112-201ENST00000363250 102 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 U3.11-201ENST00000364476 212 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 MOB1AP2-201ENST00000446060 614 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 AP003385.6-201ENST00000531603 374 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 HPRT1P3-201ENST00000539521 576 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC1.55□□□□□ -2.16
HSPG2P98160 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC1.55□□□□□ -2.16
HSPG2P98160 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.55□□□□□ -2.16
HSPG2P98160 AP004247.3-201ENST00000608682 624 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 AC008121.2-201ENST00000614647 523 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.55□□□□□ -2.16
HSPG2P98160 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
HSPG2P98160 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
HSPG2P98160 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.55□□□□□ -2.16
HSPG2P98160 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC1.55□□□□□ -2.16
HSPG2P98160 SNRPGP9-201ENST00000456025 225 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
HSPG2P98160 TRMT112P2-201ENST00000512910 132 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.55□□□□□ -2.16
HSPG2P98160 AP000790.1-201ENST00000528891 737 ntBASIC1.55□□□□□ -2.16
HSPG2P98160 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HSPG2P98160 AC011494.1-201ENST00000596454 237 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms