Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 KLHL2P1-201ENST00000508691 521 ntBASIC2.31□□□□□ -2.04
LSM3P62310 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.31□□□□□ -2.04
LSM3P62310 MTND2P26-201ENST00000528255 1029 ntBASIC2.31□□□□□ -2.04
LSM3P62310 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
LSM3P62310 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.31□□□□□ -2.04
LSM3P62310 AC096947.1-201ENST00000603233 470 ntBASIC2.31□□□□□ -2.04
LSM3P62310 AL645944.1-201ENST00000603857 493 ntBASIC2.31□□□□□ -2.04
LSM3P62310 AL049779.4-201ENST00000604500 156 ntBASIC2.31□□□□□ -2.04
LSM3P62310 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.31□□□□□ -2.04
LSM3P62310 AL390240.1-201ENST00000612950 384 ntBASIC2.31□□□□□ -2.04
LSM3P62310 AL136164.4-201ENST00000625013 2135 ntBASIC2.31□□□□□ -2.04
LSM3P62310 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
LSM3P62310 AL512283.1-201ENST00000606756 1384 ntBASIC2.31□□□□□ -2.04
LSM3P62310 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LSM3P62310 AL359715.4-201ENST00000606629 1436 ntBASIC2.31□□□□□ -2.04
LSM3P62310 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LSM3P62310 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.31□□□□□ -2.04
LSM3P62310 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.3□□□□□ -2.04
LSM3P62310 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LSM3P62310 AL355596.1-201ENST00000565399 3996 ntBASIC2.3□□□□□ -2.04
LSM3P62310 AC005336.3-201ENST00000623833 2679 ntBASIC2.3□□□□□ -2.04
LSM3P62310 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LSM3P62310 RPL21P132-201ENST00000331267 462 ntBASIC2.3□□□□□ -2.04
LSM3P62310 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LSM3P62310 RNU1-109P-201ENST00000383960 147 ntBASIC2.3□□□□□ -2.04
LSM3P62310 RNU6-629P-201ENST00000384061 103 ntBASIC2.3□□□□□ -2.04
LSM3P62310 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
LSM3P62310 EIF5P1-201ENST00000400019 1231 ntBASIC2.3□□□□□ -2.04
LSM3P62310 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.3□□□□□ -2.04
LSM3P62310 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.3□□□□□ -2.04
LSM3P62310 AC005517.2-201ENST00000424673 553 ntBASIC2.3□□□□□ -2.04
LSM3P62310 RPL21P66-201ENST00000426566 466 ntBASIC2.3□□□□□ -2.04
LSM3P62310 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LSM3P62310 RPL17P49-201ENST00000443728 411 ntBASIC2.3□□□□□ -2.04
LSM3P62310 BX276092.4-201ENST00000452056 248 ntBASIC2.3□□□□□ -2.04
LSM3P62310 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.3□□□□□ -2.04
LSM3P62310 RPL37P3-201ENST00000456825 293 ntBASIC2.3□□□□□ -2.04
LSM3P62310 RPL7P15-201ENST00000461190 712 ntBASIC2.3□□□□□ -2.04
LSM3P62310 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.3□□□□□ -2.04
LSM3P62310 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.3□□□□□ -2.04
LSM3P62310 RNU6-711P-201ENST00000517255 106 ntBASIC2.3□□□□□ -2.04
LSM3P62310 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.3□□□□□ -2.04
LSM3P62310 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.3□□□□□ -2.04
LSM3P62310 CENPUP2-201ENST00000555897 1186 ntBASIC2.3□□□□□ -2.04
LSM3P62310 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.3□□□□□ -2.04
LSM3P62310 AC138761.3-201ENST00000579993 334 ntBASIC2.3□□□□□ -2.04
LSM3P62310 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.3□□□□□ -2.04
LSM3P62310 MIR5092-201ENST00000583139 88 ntBASIC2.3□□□□□ -2.04
LSM3P62310 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.3□□□□□ -2.04
LSM3P62310 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.3□□□□□ -2.04
LSM3P62310 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.3□□□□□ -2.04
LSM3P62310 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LSM3P62310 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.3□□□□□ -2.04
LSM3P62310 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LSM3P62310 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LSM3P62310 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LSM3P62310 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LSM3P62310 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LSM3P62310 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.29□□□□□ -2.04
LSM3P62310 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.29□□□□□ -2.04
LSM3P62310 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.29□□□□□ -2.04
LSM3P62310 RNU6-1293P-201ENST00000384077 107 ntBASIC2.29□□□□□ -2.04
LSM3P62310 SNORA80E-201ENST00000384744 137 ntBASIC2.29□□□□□ -2.04
LSM3P62310 HNRNPDP2-201ENST00000406475 478 ntBASIC2.29□□□□□ -2.04
LSM3P62310 AL592148.1-201ENST00000413568 445 ntBASIC2.29□□□□□ -2.04
LSM3P62310 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.29□□□□□ -2.04
LSM3P62310 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.29□□□□□ -2.04
LSM3P62310 AC007389.2-201ENST00000434630 306 ntBASIC2.29□□□□□ -2.04
LSM3P62310 AC011816.1-201ENST00000441346 546 ntBASIC2.29□□□□□ -2.04
LSM3P62310 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LSM3P62310 AL513343.1-201ENST00000451818 792 ntBASIC2.29□□□□□ -2.04
LSM3P62310 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.29□□□□□ -2.04
LSM3P62310 AC128657.1-201ENST00000549459 145 ntBASIC2.29□□□□□ -2.04
LSM3P62310 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.29□□□□□ -2.04
LSM3P62310 AC090616.5-202ENST00000582111 297 ntBASIC2.29□□□□□ -2.04
LSM3P62310 VN1R85P-201ENST00000601587 426 ntBASIC2.29□□□□□ -2.04
LSM3P62310 AC024153.1-201ENST00000603103 365 ntBASIC2.29□□□□□ -2.04
LSM3P62310 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.29□□□□□ -2.04
LSM3P62310 MIR7973-1-201ENST00000614683 76 ntBASIC2.29□□□□□ -2.04
LSM3P62310 SNHG22-203ENST00000617833 660 ntBASIC2.29□□□□□ -2.04
LSM3P62310 RNU6-156P-201ENST00000621869 107 ntBASIC2.29□□□□□ -2.04
LSM3P62310 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.29□□□□□ -2.04
LSM3P62310 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.29□□□□□ -2.04
LSM3P62310 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.29□□□□□ -2.04
LSM3P62310 AC096644.4-201ENST00000563417 2912 ntBASIC2.28□□□□□ -2.04
LSM3P62310 AC103988.1-201ENST00000566382 2177 ntBASIC2.28□□□□□ -2.04
LSM3P62310 SNORA63.1-201ENST00000362493 131 ntBASIC2.28□□□□□ -2.04
LSM3P62310 SNORA70.2-201ENST00000364506 135 ntBASIC2.28□□□□□ -2.04
LSM3P62310 RNU1-100P-201ENST00000365255 165 ntBASIC2.28□□□□□ -2.04
LSM3P62310 OR52E6-202ENST00000379946 954 ntBASIC2.28□□□□□ -2.04
LSM3P62310 RNU6-851P-201ENST00000384565 107 ntBASIC2.28□□□□□ -2.04
LSM3P62310 U3.37-201ENST00000408528 213 ntBASIC2.28□□□□□ -2.04
LSM3P62310 RN7SKP263-201ENST00000411194 309 ntBASIC2.28□□□□□ -2.04
LSM3P62310 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.28□□□□□ -2.04
LSM3P62310 AF274854.1-201ENST00000413236 615 ntBASIC2.28□□□□□ -2.04
LSM3P62310 RPLP0P7-201ENST00000416050 667 ntBASIC2.28□□□□□ -2.04
LSM3P62310 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.28□□□□□ -2.04
LSM3P62310 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.28□□□□□ -2.04
LSM3P62310 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.28□□□□□ -2.04
LSM3P62310 AC018644.1-201ENST00000429934 551 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms