Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 ZNF705CP-201ENST00000530515 889 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AC007458.1-201ENST00000542812 373 ntBASIC3.24□□□□□ -1.89
LIM2P55344 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.24□□□□□ -1.89
LIM2P55344 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.24□□□□□ -1.89
LIM2P55344 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.24□□□□□ -1.89
LIM2P55344 SULT1C2P1-202ENST00000562418 459 ntBASIC3.24□□□□□ -1.89
LIM2P55344 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.24□□□□□ -1.89
LIM2P55344 AGGF1P8-201ENST00000562979 1000 ntBASIC3.24□□□□□ -1.89
LIM2P55344 MIR4429-201ENST00000580105 73 ntBASIC3.24□□□□□ -1.89
LIM2P55344 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.24□□□□□ -1.89
LIM2P55344 AC090616.5-202ENST00000582111 297 ntBASIC3.24□□□□□ -1.89
LIM2P55344 OR4G1P-201ENST00000588632 938 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AC006557.5-201ENST00000603126 811 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AL355812.1-201ENST00000603215 216 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.24□□□□□ -1.89
LIM2P55344 YWHAQP7-201ENST00000603536 658 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AL009028.1-201ENST00000604895 802 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AC092953.2-201ENST00000608000 699 ntBASIC3.24□□□□□ -1.89
LIM2P55344 C2orf27A-204ENST00000623058 969 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AC000367.1-201ENST00000452711 1766 ntBASIC3.24□□□□□ -1.89
LIM2P55344 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LIM2P55344 AL359893.1-201ENST00000447628 1580 ntBASIC3.24□□□□□ -1.89
LIM2P55344 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.24□□□□□ -1.89
LIM2P55344 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.24□□□□□ -1.89
LIM2P55344 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LIM2P55344 RIOK3P1-201ENST00000418778 1528 ntBASIC3.24□□□□□ -1.89
LIM2P55344 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.24□□□□□ -1.89
LIM2P55344 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LIM2P55344 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.23□□□□□ -1.89
LIM2P55344 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LIM2P55344 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LIM2P55344 RNU6-1066P-201ENST00000363573 105 ntBASIC3.23□□□□□ -1.89
LIM2P55344 RNU1-85P-201ENST00000364127 164 ntBASIC3.23□□□□□ -1.89
LIM2P55344 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.23□□□□□ -1.89
LIM2P55344 Z99755.1-201ENST00000414048 380 ntBASIC3.23□□□□□ -1.89
LIM2P55344 Z75741.2-201ENST00000417272 1167 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.23□□□□□ -1.89
LIM2P55344 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.23□□□□□ -1.89
LIM2P55344 AC005517.2-201ENST00000424673 553 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AP000907.1-201ENST00000428428 510 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AL050321.1-201ENST00000432363 400 ntBASIC3.23□□□□□ -1.89
LIM2P55344 GTF2IP3-201ENST00000433887 494 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.23□□□□□ -1.89
LIM2P55344 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LIM2P55344 GTF2IP7-202ENST00000436677 309 ntBASIC3.23□□□□□ -1.89
LIM2P55344 VN1R34P-201ENST00000447387 883 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.23□□□□□ -1.89
LIM2P55344 RPL26P28-201ENST00000451325 435 ntBASIC3.23□□□□□ -1.89
LIM2P55344 HMGB3P30-201ENST00000457863 606 ntBASIC3.23□□□□□ -1.89
LIM2P55344 PNPLA4P1-201ENST00000458328 305 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AC021205.2-201ENST00000480069 347 ntBASIC3.23□□□□□ -1.89
LIM2P55344 RN7SL293P-201ENST00000481765 281 ntBASIC3.23□□□□□ -1.89
LIM2P55344 DYNLL1P6-201ENST00000503440 264 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AC109471.1-201ENST00000511631 612 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AC023141.12-201ENST00000512399 199 ntBASIC3.23□□□□□ -1.89
LIM2P55344 RNU6-276P-201ENST00000516114 96 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AC027309.2-201ENST00000520566 192 ntBASIC3.23□□□□□ -1.89
LIM2P55344 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
LIM2P55344 AP001636.2-201ENST00000525517 696 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.23□□□□□ -1.89
LIM2P55344 AC007424.1-203ENST00000554613 687 ntBASIC3.23□□□□□ -1.89
LIM2P55344 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.23□□□□□ -1.89
LIM2P55344 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.23□□□□□ -1.89
LIM2P55344 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.23□□□□□ -1.89
LIM2P55344 MIR4444-1-201ENST00000581696 74 ntBASIC3.23□□□□□ -1.89
LIM2P55344 MIR4444-2-201ENST00000584390 74 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.23□□□□□ -1.89
LIM2P55344 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.23□□□□□ -1.89
LIM2P55344 AL513477.2-201ENST00000607858 568 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AL391261.4-201ENST00000616012 481 ntBASIC3.23□□□□□ -1.89
LIM2P55344 U73479.1-201ENST00000618062 168 ntBASIC3.23□□□□□ -1.89
LIM2P55344 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LIM2P55344 AC123767.1-202ENST00000620407 817 ntBASIC3.23□□□□□ -1.89
LIM2P55344 AC009269.6-201ENST00000621778 588 ntBASIC3.23□□□□□ -1.89
LIM2P55344 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LIM2P55344 OR8B1P-202ENST00000641132 1178 ntBASIC3.23□□□□□ -1.89
LIM2P55344 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.23□□□□□ -1.89
LIM2P55344 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.23□□□□□ -1.89
LIM2P55344 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.23□□□□□ -1.89
LIM2P55344 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LIM2P55344 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LIM2P55344 AL356274.2-201ENST00000624379 3752 ntBASIC3.23□□□□□ -1.89
LIM2P55344 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LIM2P55344 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LIM2P55344 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LIM2P55344 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.22□□□□□ -1.89
LIM2P55344 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.22□□□□□ -1.89
LIM2P55344 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIM2P55344 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LIM2P55344 AL049781.1-201ENST00000623195 3585 ntBASIC3.22□□□□□ -1.89
LIM2P55344 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIM2P55344 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LIM2P55344 RNA5SP119-201ENST00000362715 117 ntBASIC3.22□□□□□ -1.89
LIM2P55344 RNA5SP50-201ENST00000363731 107 ntBASIC3.22□□□□□ -1.89
LIM2P55344 RNU6-707P-201ENST00000364647 95 ntBASIC3.22□□□□□ -1.89
LIM2P55344 RNU6-224P-201ENST00000384055 107 ntBASIC3.22□□□□□ -1.89
LIM2P55344 MIR490-201ENST00000384865 128 ntBASIC3.22□□□□□ -1.89
LIM2P55344 AL133264.1-201ENST00000407157 562 ntBASIC3.22□□□□□ -1.89
LIM2P55344 AL023807.1-201ENST00000407932 359 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms