Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDH11P55287 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH11P55287 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH11P55287 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDH11P55287 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH11P55287 RNU6-553P-201ENST00000364047 96 ntBASIC3.68□□□□□ -1.82
CDH11P55287 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDH11P55287 CYCSP45-201ENST00000402289 315 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC069218.2-201ENST00000411665 344 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH11P55287 AC108032.1-201ENST00000416706 207 ntBASIC3.68□□□□□ -1.82
CDH11P55287 RPS15AP40-201ENST00000419621 391 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC234781.2-201ENST00000426370 994 ntBASIC3.68□□□□□ -1.82
CDH11P55287 FTH1P6-201ENST00000430768 320 ntBASIC3.68□□□□□ -1.82
CDH11P55287 ATP5HP2-201ENST00000433885 485 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH11P55287 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH11P55287 VN1R10P-201ENST00000447106 875 ntBASIC3.68□□□□□ -1.82
CDH11P55287 RPL39P6-201ENST00000448289 150 ntBASIC3.68□□□□□ -1.82
CDH11P55287 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH11P55287 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH11P55287 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH11P55287 USP9YP10-201ENST00000454868 628 ntBASIC3.68□□□□□ -1.82
CDH11P55287 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH11P55287 TRBV26-201ENST00000456572 344 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC010468.1-201ENST00000461022 817 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC092757.1-201ENST00000467293 467 ntBASIC3.68□□□□□ -1.82
CDH11P55287 BZW1P2-201ENST00000473537 826 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AF213884.1-201ENST00000488102 463 ntBASIC3.68□□□□□ -1.82
CDH11P55287 RPL29P14-201ENST00000495837 428 ntBASIC3.68□□□□□ -1.82
CDH11P55287 NIPA2P2-201ENST00000496376 1083 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH11P55287 AC093824.1-201ENST00000508796 343 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC117522.2-201ENST00000510049 657 ntBASIC3.68□□□□□ -1.82
CDH11P55287 USP9YP5-201ENST00000511770 630 ntBASIC3.68□□□□□ -1.82
CDH11P55287 MIR2114-201ENST00000516645 80 ntBASIC3.68□□□□□ -1.82
CDH11P55287 RNU6-759P-201ENST00000516740 103 ntBASIC3.68□□□□□ -1.82
CDH11P55287 RNA5SP143-201ENST00000516936 115 ntBASIC3.68□□□□□ -1.82
CDH11P55287 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH11P55287 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH11P55287 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH11P55287 AL356057.1-201ENST00000533798 831 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH11P55287 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH11P55287 CYCSP2-201ENST00000558168 301 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH11P55287 AC022655.2-201ENST00000577280 318 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC012417.1-201ENST00000582307 1039 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.68□□□□□ -1.82
CDH11P55287 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH11P55287 AC110760.3-201ENST00000598794 467 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC244505.7-201ENST00000599675 272 ntBASIC3.68□□□□□ -1.82
CDH11P55287 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC121247.2-201ENST00000604776 136 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH11P55287 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH11P55287 AC024560.3-201ENST00000608482 349 ntBASIC3.68□□□□□ -1.82
CDH11P55287 AC018816.2-201ENST00000621460 353 ntBASIC3.68□□□□□ -1.82
CDH11P55287 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDH11P55287 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH11P55287 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH11P55287 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH11P55287 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH11P55287 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CDH11P55287 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH11P55287 SNORD35B-201ENST00000363660 87 ntBASIC3.67□□□□□ -1.82
CDH11P55287 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH11P55287 RNU6-1122P-201ENST00000384449 107 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AL023807.1-201ENST00000407932 359 ntBASIC3.67□□□□□ -1.82
CDH11P55287 RN7SKP182-201ENST00000410772 298 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH11P55287 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH11P55287 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH11P55287 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.67□□□□□ -1.82
CDH11P55287 OR4C10P-201ENST00000434991 931 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AC092427.1-201ENST00000439177 601 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH11P55287 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH11P55287 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH11P55287 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH11P55287 AL136126.1-201ENST00000473603 402 ntBASIC3.67□□□□□ -1.82
CDH11P55287 NCOR1P1-202ENST00000486162 291 ntBASIC3.67□□□□□ -1.82
CDH11P55287 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 RPF2P2-201ENST00000504693 896 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.67□□□□□ -1.82
CDH11P55287 RN7SKP277-201ENST00000516895 283 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AC104986.1-201ENST00000517978 436 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 AC105233.3-201ENST00000531125 744 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms