Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH4P55283 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH4P55283 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CDH4P55283 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH4P55283 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH4P55283 RIOK3P1-201ENST00000418778 1528 ntBASIC3.39□□□□□ -1.87
CDH4P55283 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH4P55283 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH4P55283 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH4P55283 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH4P55283 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CDH4P55283 RNU6-1181P-201ENST00000384191 106 ntBASIC3.39□□□□□ -1.87
CDH4P55283 RNU6-837P-201ENST00000391056 108 ntBASIC3.39□□□□□ -1.87
CDH4P55283 OFD1P18Y-201ENST00000420889 959 ntBASIC3.39□□□□□ -1.87
CDH4P55283 AL590103.1-201ENST00000434488 307 ntBASIC3.39□□□□□ -1.87
CDH4P55283 HMGB1P12-201ENST00000438594 598 ntBASIC3.39□□□□□ -1.87
CDH4P55283 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH4P55283 SLC31A1P1-201ENST00000451221 567 ntBASIC3.39□□□□□ -1.87
CDH4P55283 HMGN3P1-201ENST00000453847 193 ntBASIC3.39□□□□□ -1.87
CDH4P55283 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH4P55283 BTF3P5-201ENST00000457252 467 ntBASIC3.39□□□□□ -1.87
CDH4P55283 AC004801.2-202ENST00000463559 283 ntBASIC3.39□□□□□ -1.87
CDH4P55283 RPL23AP44-201ENST00000482216 473 ntBASIC3.39□□□□□ -1.87
CDH4P55283 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH4P55283 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH4P55283 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CDH4P55283 PHBP14-201ENST00000512887 367 ntBASIC3.39□□□□□ -1.87
CDH4P55283 MIR2276-201ENST00000516886 89 ntBASIC3.39□□□□□ -1.87
CDH4P55283 IGHV3-76-201ENST00000522465 295 ntBASIC3.39□□□□□ -1.87
CDH4P55283 AC124293.1-201ENST00000530034 493 ntBASIC3.39□□□□□ -1.87
CDH4P55283 AL139174.1-201ENST00000531489 886 ntBASIC3.39□□□□□ -1.87
CDH4P55283 AP003385.6-201ENST00000531603 374 ntBASIC3.39□□□□□ -1.87
CDH4P55283 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH4P55283 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.39□□□□□ -1.87
CDH4P55283 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.39□□□□□ -1.87
CDH4P55283 BNIP3P22-201ENST00000593399 556 ntBASIC3.39□□□□□ -1.87
CDH4P55283 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH4P55283 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH4P55283 AL162713.1-201ENST00000604480 262 ntBASIC3.39□□□□□ -1.87
CDH4P55283 AC012468.1-201ENST00000604888 430 ntBASIC3.39□□□□□ -1.87
CDH4P55283 AC090425.2-201ENST00000608818 501 ntBASIC3.39□□□□□ -1.87
CDH4P55283 AC006023.2-201ENST00000609916 167 ntBASIC3.39□□□□□ -1.87
CDH4P55283 uc_338.1-201ENST00000612113 180 ntBASIC3.39□□□□□ -1.87
CDH4P55283 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CDH4P55283 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CDH4P55283 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CDH4P55283 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH4P55283 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH4P55283 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDH4P55283 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH4P55283 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
CDH4P55283 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
CDH4P55283 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH4P55283 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CDH4P55283 MIR30E-201ENST00000362104 92 ntBASIC3.38□□□□□ -1.87
CDH4P55283 RNU1-70P-201ENST00000362618 164 ntBASIC3.38□□□□□ -1.87
CDH4P55283 RNVU1-3-201ENST00000364313 161 ntBASIC3.38□□□□□ -1.87
CDH4P55283 SNORA70.4-201ENST00000365509 134 ntBASIC3.38□□□□□ -1.87
CDH4P55283 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH4P55283 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDH4P55283 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH4P55283 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDH4P55283 AP000567.1-201ENST00000406413 156 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDH4P55283 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH4P55283 AL606495.1-201ENST00000422100 813 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AC246680.2-201ENST00000422106 389 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH4P55283 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH4P55283 TXNP1-201ENST00000441872 371 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AL591503.2-201ENST00000442314 1005 ntBASIC3.38□□□□□ -1.87
CDH4P55283 HSFY3P-201ENST00000444242 1191 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AL096803.2-201ENST00000450032 677 ntBASIC3.38□□□□□ -1.87
CDH4P55283 PTGES3P5-201ENST00000455109 434 ntBASIC3.38□□□□□ -1.87
CDH4P55283 HMGN2P16-201ENST00000456802 261 ntBASIC3.38□□□□□ -1.87
CDH4P55283 snoU13.22-201ENST00000459428 104 ntBASIC3.38□□□□□ -1.87
CDH4P55283 snoU13.3-201ENST00000459441 104 ntBASIC3.38□□□□□ -1.87
CDH4P55283 OR5H3P-201ENST00000502817 919 ntBASIC3.38□□□□□ -1.87
CDH4P55283 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH4P55283 ARL2BPP6-201ENST00000512757 439 ntBASIC3.38□□□□□ -1.87
CDH4P55283 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.38□□□□□ -1.87
CDH4P55283 OR4A45P-201ENST00000529954 901 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AC109635.4-202ENST00000531666 412 ntBASIC3.38□□□□□ -1.87
CDH4P55283 OR8K4P-201ENST00000534608 872 ntBASIC3.38□□□□□ -1.87
CDH4P55283 HIGD1AP1-201ENST00000550979 275 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AC011611.5-201ENST00000552477 578 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AL845331.3-202ENST00000562856 261 ntBASIC3.38□□□□□ -1.87
CDH4P55283 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH4P55283 AL020997.3-201ENST00000602843 359 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH4P55283 AC011816.2-201ENST00000607089 556 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AL513477.2-201ENST00000607858 568 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AP004247.3-201ENST00000608682 624 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AC096577.2-201ENST00000611455 153 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AL354976.1-201ENST00000613843 387 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AL157817.1-201ENST00000614264 790 ntBASIC3.38□□□□□ -1.87
CDH4P55283 AC009464.1-201ENST00000615731 469 ntBASIC3.38□□□□□ -1.87
CDH4P55283 PLCE1P1-201ENST00000622094 305 ntBASIC3.38□□□□□ -1.87
CDH4P55283 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH4P55283 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms