Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 RNU6-906P-201ENST00000384700 70 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 MT-TC-201ENST00000387405 66 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMK1P53667 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMK1P53667 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.96□□□□□ -1.78
LIMK1P53667 AL159987.2-201ENST00000432754 307 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.96□□□□□ -1.78
LIMK1P53667 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.96□□□□□ -1.78
LIMK1P53667 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
LIMK1P53667 SNORA71B-202ENST00000439232 272 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 AC006011.1-201ENST00000442758 349 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 AC007327.1-201ENST00000447461 264 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 RN7SL585P-201ENST00000470538 280 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 AC106707.2-201ENST00000484182 374 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMK1P53667 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMK1P53667 RNU6-1073P-201ENST00000517182 106 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.96□□□□□ -1.78
LIMK1P53667 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMK1P53667 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 AC138915.2-201ENST00000569776 97 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 AC016877.3-201ENST00000606778 504 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 AC106052.1-201ENST00000608029 497 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 MIR6868-201ENST00000611215 58 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 AC005332.6-201ENST00000613178 446 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 AL078595.3-201ENST00000623815 1166 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.96□□□□□ -1.78
LIMK1P53667 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 AC007256.1-201ENST00000392253 2765 ntBASIC3.96□□□□□ -1.78
LIMK1P53667 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK1P53667 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK1P53667 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK1P53667 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LIMK1P53667 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK1P53667 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK1P53667 AL133384.1-201ENST00000412744 351 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 AL161449.1-201ENST00000414531 1199 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
LIMK1P53667 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMK1P53667 AL513175.2-201ENST00000422071 443 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMK1P53667 HSPD1P21-201ENST00000436541 245 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 VN1R25P-201ENST00000443385 738 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 MTCO1P48-201ENST00000448024 1096 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMK1P53667 MTCO3P35-201ENST00000485582 781 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 RPL32P34-201ENST00000486380 400 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.95□□□□□ -1.78
LIMK1P53667 AC134050.1-201ENST00000495088 933 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.95□□□□□ -1.78
LIMK1P53667 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.95□□□□□ -1.78
LIMK1P53667 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMK1P53667 AC017037.1-201ENST00000508460 471 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 HMGN1P11-201ENST00000508668 303 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMK1P53667 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMK1P53667 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMK1P53667 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMK1P53667 HIGD1AP10-201ENST00000527837 282 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 AP000790.1-201ENST00000528891 737 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMK1P53667 AC109635.4-202ENST00000531666 412 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMK1P53667 SYF2P1-201ENST00000550658 413 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.95□□□□□ -1.78
LIMK1P53667 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.95□□□□□ -1.78
LIMK1P53667 AC087499.8-201ENST00000578406 226 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.95□□□□□ -1.78
LIMK1P53667 MIR5684-201ENST00000585074 65 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.95□□□□□ -1.78
LIMK1P53667 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMK1P53667 AC009974.1-201ENST00000608881 455 ntBASIC3.95□□□□□ -1.78
LIMK1P53667 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
LIMK1P53667 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.95□□□□□ -1.78
LIMK1P53667 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.95□□□□□ -1.78
LIMK1P53667 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK1P53667 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.95□□□□□ -1.78
LIMK1P53667 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK1P53667 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMK1P53667 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.94□□□□□ -1.78
LIMK1P53667 AC058791.1-201ENST00000608412 3198 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
LIMK1P53667 ZNF962P-201ENST00000443465 3140 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.94□□□□□ -1.78
LIMK1P53667 Y_RNA.25-201ENST00000362528 102 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 RNU6-374P-201ENST00000364146 108 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms