Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC234781.5-201ENST00000508429 271 ntBASIC3.07□□□□□ -1.92
NUP98P52948 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.07□□□□□ -1.92
NUP98P52948 RFPL1S-203ENST00000539579 330 ntBASIC3.07□□□□□ -1.92
NUP98P52948 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.07□□□□□ -1.92
NUP98P52948 AC112503.1-201ENST00000608436 391 ntBASIC3.07□□□□□ -1.92
NUP98P52948 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
NUP98P52948 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NUP98P52948 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
NUP98P52948 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.07□□□□□ -1.92
NUP98P52948 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
NUP98P52948 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
NUP98P52948 MAPK10-322ENST00000641485 4530 ntBASIC3.07□□□□□ -1.92
NUP98P52948 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NUP98P52948 AL445437.1-201ENST00000623157 3087 ntBASIC3.07□□□□□ -1.92
NUP98P52948 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.07□□□□□ -1.92
NUP98P52948 RNU4-53P-201ENST00000410828 140 ntBASIC3.07□□□□□ -1.92
NUP98P52948 UBE2D3P1-201ENST00000436669 444 ntBASIC3.07□□□□□ -1.92
NUP98P52948 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NUP98P52948 IGKV3-31-201ENST00000523109 329 ntBASIC3.07□□□□□ -1.92
NUP98P52948 AP000867.2-201ENST00000532468 320 ntBASIC3.07□□□□□ -1.92
NUP98P52948 CKS1BP1-201ENST00000555221 240 ntBASIC3.07□□□□□ -1.92
NUP98P52948 AC009318.3-201ENST00000616916 503 ntBASIC3.07□□□□□ -1.92
NUP98P52948 Z99129.2-201ENST00000619967 314 ntBASIC3.07□□□□□ -1.92
NUP98P52948 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
NUP98P52948 AC090229.1-201ENST00000590983 1609 ntBASIC3.06□□□□□ -1.92
NUP98P52948 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.06□□□□□ -1.92
NUP98P52948 FAT1P1-201ENST00000406588 507 ntBASIC3.06□□□□□ -1.92
NUP98P52948 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.06□□□□□ -1.92
NUP98P52948 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.06□□□□□ -1.92
NUP98P52948 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NUP98P52948 RPS29P21-201ENST00000496272 170 ntBASIC3.06□□□□□ -1.92
NUP98P52948 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.06□□□□□ -1.92
NUP98P52948 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NUP98P52948 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.06□□□□□ -1.92
NUP98P52948 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.06□□□□□ -1.92
NUP98P52948 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.06□□□□□ -1.92
NUP98P52948 MIR4644-201ENST00000579929 84 ntBASIC3.06□□□□□ -1.92
NUP98P52948 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.06□□□□□ -1.92
NUP98P52948 AC068313.1-201ENST00000604028 1008 ntBASIC3.06□□□□□ -1.92
NUP98P52948 AC007423.1-201ENST00000605009 627 ntBASIC3.06□□□□□ -1.92
NUP98P52948 AC009452.1-201ENST00000640823 606 ntBASIC3.06□□□□□ -1.92
NUP98P52948 OR10AB1P-202ENST00000641219 1686 ntBASIC3.06□□□□□ -1.92
NUP98P52948 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NUP98P52948 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.06□□□□□ -1.92
NUP98P52948 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NUP98P52948 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NUP98P52948 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.05□□□□□ -1.92
NUP98P52948 AC092079.1-201ENST00000558620 1985 ntBASIC3.05□□□□□ -1.92
NUP98P52948 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP98P52948 MTND4LP13-201ENST00000425022 298 ntBASIC3.05□□□□□ -1.92
NUP98P52948 FAM103A2P-201ENST00000444122 354 ntBASIC3.05□□□□□ -1.92
NUP98P52948 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.05□□□□□ -1.92
NUP98P52948 AP002371.1-201ENST00000463604 433 ntBASIC3.05□□□□□ -1.92
NUP98P52948 AC026436.1-201ENST00000510537 270 ntBASIC3.05□□□□□ -1.92
NUP98P52948 AC068446.3-201ENST00000555285 382 ntBASIC3.05□□□□□ -1.92
NUP98P52948 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
NUP98P52948 Z98742.3-201ENST00000418637 326 ntBASIC3.05□□□□□ -1.92
NUP98P52948 AL137014.1-201ENST00000420490 1226 ntBASIC3.05□□□□□ -1.92
NUP98P52948 AC233981.1-201ENST00000423224 461 ntBASIC3.05□□□□□ -1.92
NUP98P52948 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NUP98P52948 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP98P52948 RPL36AP51-201ENST00000487216 318 ntBASIC3.05□□□□□ -1.92
NUP98P52948 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP98P52948 ACTR6P1-201ENST00000514311 1104 ntBASIC3.05□□□□□ -1.92
NUP98P52948 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.05□□□□□ -1.92
NUP98P52948 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.05□□□□□ -1.92
NUP98P52948 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.05□□□□□ -1.92
NUP98P52948 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.05□□□□□ -1.92
NUP98P52948 AL442163.2-201ENST00000553912 710 ntBASIC3.05□□□□□ -1.92
NUP98P52948 ATP5F1P7-201ENST00000567330 760 ntBASIC3.05□□□□□ -1.92
NUP98P52948 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.05□□□□□ -1.92
NUP98P52948 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NUP98P52948 AC092881.1-201ENST00000638218 2733 ntBASIC3.04□□□□□ -1.92
NUP98P52948 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NUP98P52948 RNU4-7P-201ENST00000364758 141 ntBASIC3.04□□□□□ -1.92
NUP98P52948 EI24P2-201ENST00000397776 1076 ntBASIC3.04□□□□□ -1.92
NUP98P52948 SNORA3.2-201ENST00000408221 125 ntBASIC3.04□□□□□ -1.92
NUP98P52948 RN7SKP140-201ENST00000411196 284 ntBASIC3.04□□□□□ -1.92
NUP98P52948 AC007064.1-201ENST00000412238 351 ntBASIC3.04□□□□□ -1.92
NUP98P52948 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NUP98P52948 HMGN2P3-201ENST00000433603 273 ntBASIC3.04□□□□□ -1.92
NUP98P52948 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
NUP98P52948 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.04□□□□□ -1.92
NUP98P52948 HMGN2P5-201ENST00000436882 273 ntBASIC3.04□□□□□ -1.92
NUP98P52948 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.04□□□□□ -1.92
NUP98P52948 AC104389.3-201ENST00000445629 235 ntBASIC3.04□□□□□ -1.92
NUP98P52948 RPL23AP23-201ENST00000452590 471 ntBASIC3.04□□□□□ -1.92
NUP98P52948 RPL23AP11-201ENST00000475260 469 ntBASIC3.04□□□□□ -1.92
NUP98P52948 OR4G11P-201ENST00000492842 939 ntBASIC3.04□□□□□ -1.92
NUP98P52948 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.04□□□□□ -1.92
NUP98P52948 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.04□□□□□ -1.92
NUP98P52948 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NUP98P52948 U4.3-201ENST00000621047 82 ntBASIC3.04□□□□□ -1.92
NUP98P52948 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUP98P52948 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NUP98P52948 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.03□□□□□ -1.92
NUP98P52948 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NUP98P52948 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NUP98P52948 RNU4-26P-201ENST00000410270 107 ntBASIC3.03□□□□□ -1.92
NUP98P52948 AL606490.7-201ENST00000433136 191 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms